Polypterus senegalus (gray bichir): 120529005
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Entry
120529005 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120529005
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120529005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
Tli4_N
Motif
Other DBs
NCBI-GeneID:
120529005
NCBI-ProteinID:
XP_039609001
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All DBs
Position
4:complement(247196610..247213206)
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AA seq
551 aa
AA seq
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MAEAQLFVSEDEFTCSVCLDTLIDPVTILCGHNFCLKCLTDCWDQNQECSCPQCRHTFTT
RPELNKNTLLNEVVKKLKKTALSPPQSQSYAGPGDVECDFCTGKKFRAVKSCLTCMASYC
QTHLQPHYEGDAWKGHKLVDPDRNLKEKLCEKHQKSLEMFCKTDETCICLMCVVTGHKNH
EIVELEMEREEKEKQLGATLSDIKRRLEEREKTLKETRRAMEEMKISVERVVEENENSFT
ALIRCIEEVHRKLTERKRGVSSCVLVTFKTLLLKTPETVEMTIDFHKQQSQPLTLEINDS
AVNMVDSFNVQSTTITDTLSWDMNTTTSLRRPPWTHLSSSSLLHTNSQARFAPSPITHFQ
ISSLVFFSVLSDFCPLTLDINTAHTWLHLSEGNKKVTRESAKTEYPDHPDRFDCWEQVLC
KEALTGTRCYWEVECSGYVVDIGVAYKGLRRKGRGEECGLGYNNKSWSLQWFISRYSVHH
NNKGMVISGPYSPRIGVYLDWPAGSLSFYSVSHTMTLLHRFNTSFTEPLYPGFSVGLNCS
VTISHLTPCDH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcgcagctgtttgtatcagaggatgagttcacctgctcggtgtgtctggac
accctgattgaccccgtcaccatcctctgtggacataatttctgtctgaagtgcctcacg
gactgctgggatcagaatcaagagtgcagctgtcctcagtgcagacacaccttcaccaca
aggcctgagctgaacaaaaacactctgctgaatgaagtcgttaagaaattaaagaagacg
gcactcagtcctcctcagtctcagagttatgctggccctggagatgtggagtgtgacttc
tgtactgggaagaagttcagagcagtgaagtcctgtctaacctgcatggcctcctactgt
cagactcacctgcagcctcactatgaaggagatgcctggaagggacacaagctggttgat
cctgatagaaatctgaaggagaaactctgtgagaaacatcagaaaagtctggagatgttt
tgcaaaactgatgagacctgtatctgcttgatgtgtgtggtgactggacataaaaatcat
gaaatagtcgagctggagatggaaagagaagaaaaagagaaacagctaggggcgacactg
agtgacatcaagaggagacttgaggagagagagaagacactgaaggagacgaggagggcg
atggaggagatgaagatttctgtggaaagagttgtggaagaaaatgagaacagcttcact
gctctgatacggtgcattgaggaagtgcacaggaaactgactgagaggaaaagaggggtc
tcgtcttgtgtcttggtgacattcaaaaccctgctgctcaagacccccgagacagtggaa
atgaccattgactttcacaaacagcagtcacaacctctaacactagaaatcaatgattca
gcagtcaatatggtggactccttcaacgttcagagcacaacaatcacagacactctcagc
tgggacatgaacaccaccacatcactaagaagaccaccatggactcatctcagcagctcg
tcacttcttcacacaaactctcaagcacgcttcgctcccagtcccattacacacttccag
atttcctcacttgttttcttttctgtcctttcagacttctgtcccctcacactggacatc
aacacagcacacacatggctccatctgtctgaagggaacaagaaggtgacacgtgagagt
gcaaaaaccgaatatcctgatcatcctgacagatttgactgctgggaacaagttctgtgc
aaagaggcattgactgggactcgctgttactgggaggtggagtgcagtggatatgttgtg
gatattggagttgcatataaaggactgagaaggaaaggacggggcgaggagtgcggcctt
ggatacaacaacaagtcctggagtttgcagtggtttatttccaggtactctgtgcatcac
aataacaaggggatggtaatcagtggcccctacagccccagaataggtgtgtatctggac
tggcctgctggctctctgtcattttatagcgtctcacacacaatgaccctcctgcacagg
ttcaacacctccttcactgagcccctctatccagggtttagtgttggtcttaactgcagt
gtaacaatcagccatctgacaccatgtgaccactga
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