Polypterus senegalus (gray bichir): 120529046
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Entry
120529046 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120529046
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120529046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
U-box
Exonuc_VII_L
Mt_ATP-synt_D
BCDHK_Adom3
Adenylsucc_synt
Motif
Other DBs
NCBI-GeneID:
120529046
NCBI-ProteinID:
XP_039609041
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All DBs
Position
4:252121353..252193124
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AA seq
645 aa
AA seq
DB search
MMAKAQLRGLLDEFTCSICLDTLTDPVTIPCGHNFCLKCITDYWDHRQEFFCPHCRQNFW
ARPALQRNTLLNEVIKKLKKTGLSDPPPKNYAGTGDVECDFCAGKKFRVVKSCLTCMASY
CQTHLQPHYEVAALKFHKLVDPDGNLKEKLCVKHQKSLEMFCRTDKMCICMMCGMTEHDG
HEKVELKTERAGKQKQLGATLSEIRRRLEQKEKKLKETRRTVEEMKLSVERVMREHEKSF
TDLIHCVEETHKKLKEKIKEQEKRETEKAEGVMKQIKKEIKELKRREAELKDLSETKDHL
HFLQTFSSCCVFPANRDSISFTVMADFSSEGLRKELSGLKKSLEKISQWDILARTPSGVA
SAFWCSLLESIRRTKVTITGTTARQLHQTGSEAGENLASRSHLRSSGLSPNLNILHSSRF
FVFSGREASIFTLQLPEPRSRDKFLQYFCPLTLDINTAHRDLHLSEGNKKVTWEGTRTRY
PDHSDRFECWEQVLCREALTGTRCYWEVECSGDLMMIGVTYKGLRRKIKGKDSLIGCNDK
SWYLKWSYFQYSVHHNEKWTEFSAPYSPRIGVYLDWPAGSLSFYSVSHRMTLLHRFNTSF
TEPLYPGFRLGPDSSVTISHLTPCDRLLTSTRYRSLDVPTSAGPL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatggctaaagcccagctgcgtggattacttgatgagttcacctgctcaatttgtctg
gacaccctgactgaccctgtcaccatcccctgtggtcacaatttctgtctgaaatgcatc
accgactactgggatcacagacaagagttcttctgtccgcattgtagacagaacttctgg
gcaaggcctgcactgcaaagaaatactttgctgaatgaagtcatcaagaaattaaaaaag
acaggactcagtgatcctccacctaagaattatgctggcactggagacgtggagtgtgac
ttctgtgctgggaagaagttcagagtggtgaagtcctgtctgacctgcatggcctcctac
tgtcagactcacctgcagcctcattatgaagtagcggccctgaagttccacaaactggtt
gatcctgatggaaatctgaaggagaaactctgtgtgaaacatcagaaaagtctggagatg
ttttgcagaactgacaagatgtgcatctgcatgatgtgtggaatgactgaacatgatggt
catgaaaaggtcgagctgaagacggaaagagcaggaaaacagaaacagctgggggcgaca
ctgagtgaaattaggaggagacttgaacagaaagagaagaaactgaaggagacgaggagg
acagtggaggagatgaagctttctgtggaaagagtgatgagggaacatgagaagagcttc
actgatctgattcactgcgttgaggaaacccacaagaaattaaaagagaagatcaaagaa
caagaaaagagagaaacggagaaagctgaaggagtcatgaagcaaataaagaaggagatc
aaggagctgaagaggagagaagctgaactgaaggacctttcagagaccaaggaccatctc
cacttcctgcagactttctcatcttgctgtgtctttcctgctaatagagactcgataagc
ttcactgtcatggctgatttttcttctgagggcctgagaaaggagctgtcaggtctgaaa
aagagcctggagaagatcagccagtgggacatcctggcaagaactccatcaggtgtggca
tctgctttttggtgttcattgttagagtctattaggaggaccaaagtgacaatcacaggg
acaactgctcgtcagttgcaccaaactggttctgaagcaggtgagaacctggccagcaga
agccatctccgctcttcaggactcagccctaatcttaacattctccattcttctcgtttc
tttgtattttctggtcgtgaagcttcaatcttcaccctacaacttcctgaacctcggagc
agagacaagtttttacaatacttctgtcccctcacactggacatcaacacggcacacaga
gacctccatctgtctgaagggaacaagaaggtgacatgggaggggacacggactagatat
cctgatcattctgacagatttgaatgctgggaacaagttctgtgcagagaggctctgact
gggactcgctgttactgggaggtggagtgcagtggagacctcatgatgattggagtcaca
tataaaggactgagaaggaaaataaagggcaaagatagcctcattggatgcaatgacaag
tcctggtatttgaagtggtcttatttccagtactctgtgcatcacaatgagaagtggact
gaattcagcgccccctacagccccagaataggtgtgtatctggactggcctgctggctct
ctgtcattttatagcgtctcacacagaatgaccctcctgcacaggttcaacacctccttc
actgagcccctctatccagggtttaggcttggtcctgactccagtgtaacaatcagccat
ctgacaccatgtgacagactactgaccagtactcgctaccggtcacttgatgtccccaca
agcgcaggtcctctttga
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