Polypterus senegalus (gray bichir): 120531515
Help
Entry
120531515 CDS
T08668
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120531515 (tyw1)
Enzymes [BR:
psex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
120531515 (tyw1)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120531515 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
120531515
NCBI-ProteinID:
XP_039612925
LinkDB
All DBs
Position
6:119726553..119952529
Genome browser
AA seq
737 aa
AA seq
DB search
MSAMWLLSTALMSLLFQASAAQQKDNLDSPWDYFHACFFSLWEYRLYVYLALTVSICIWI
VAQKIQKRKEFINPEKSFQNENSVQKQSIYVSGVKIFYGSQTGTAKTFANDLAEQVEGLG
LSSDVINLKEYDPEDSLAEENTSQSVCVFLMATYTDGKPTENAEWFCKWLEEASADFRYG
KTYLKGLRYAVFGLGNSVYIGHYNTVGKNVDKWLWMLSARRIMTRGEGDCNVVKSKNGSI
EGDFAVWKAKFLKRLQALAKGEKKVCTGKCKKGKCKNKKSHAKEKEVQETPGSENEFETT
SDEESGNEEEASHRAVIDVEDLGNHMKRAKKVLEVEEHHAEVQVSKQAVSNNDHSDVREM
VTPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHQCMETTPSLA
CANKCVFCWRHHTNPVGTEWRWKMDQPEKILKEALENHKNLIKQFKGVPGVKLERYEEGM
SVKHCALSLVGEPIMYPEINKFLKLLHQKKISSFLVTNAQFPEEIRSLQPVTQLYVSVDA
STKESLKKIDRPLFKDFWQRFLDSLKALEQKQQRTVYRLTLVKSWNVDEVKAYSELVSLG
KPDFIEVKGVTYCGESSASNLTMANIPWHDEVLYFVRQLADLLPDYEIASEHEHSNCLLI
AHRKFKVEGKWRTWINYERFHELMKEFEKSNGLKTFTAEDYTAETPSWAVFGAKERGFDP
VESRFQRKNKAKDISGC
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgatgtggttgctttcaacggcgttgatgtcgttgctttttcaagcttcggcg
gcgcaacagaaagataacttggacagcccttgggattattttcatgcctgtttcttttct
ctttgggaatacaggctatatgtatatctggcattgacagtcagtatatgcatctggatt
gtagctcagaaaatacaaaaaaggaaggaatttattaacccagaaaagtcctttcaaaat
gaaaactctgtgcagaaacaatccatatatgtttcaggtgtaaagattttttatggctcc
caaacgggaacagccaagacgtttgctaatgatcttgctgagcaagttgaaggcttgggt
ctgtcttcagatgttattaacttgaaagaatatgatccagaagacagcttggctgaagag
aacactagccagtcagtttgtgtgtttttgatggctacatacactgatgggaaacccact
gaaaatgcagaatggttctgtaaatggctggaagaggcctctgctgactttagatatggc
aagacatacctgaagggactgcgctatgcagtttttggattgggcaactctgtctacatt
ggacactacaatacggttggtaagaatgttgacaaatggctatggatgttgagtgccagg
aggatcatgacccgtggggagggtgactgcaatgtggtcaagagcaagaacggtagcatt
gagggagattttgctgtctggaaggccaaattcctgaaacgactgcaggcacttgcaaaa
ggagaaaaaaaagtttgcactgggaagtgcaagaaggggaaatgcaaaaacaagaagagt
catgctaaggagaaagaagtacaggagactcctggatctgagaatgaatttgagaccact
agtgatgaagagtctggtaatgaggaggaggcttcccaccgggctgtgattgatgtggag
gatttaggaaaccacatgaagagagcaaagaaagtccttgaagtagaagagcaccatgca
gaggtccaggtatctaagcaagctgttagcaataatgatcactcagacgttagagaaatg
gtgactccagccttgagggatgctcttacaaaacaagggtataagctgataggaagccat
tcaggtgtgaagctctgtcgttggaccaagtcaatgttaagaggaagaggagggtgttac
aagcataccttttatggtattgagtcacaccaatgtatggaaactacaccaagcttggcc
tgtgcaaataaatgtgttttttgttggagacaccatactaaccctgttgggacagagtgg
aggtggaagatggaccagcccgaaaaaatcttgaaggaggcacttgaaaaccacaagaat
ctaattaaacaatttaaaggagtacctggtgttaagctagagcgatatgaagaaggcatg
tctgttaaacattgtgctctgtccttggtaggcgagcctatcatgtatcctgagattaat
aaattcctgaagttgttacaccagaaaaagatttctagcttcttggtaaccaatgctcag
ttccctgaggaaattaggagtctccagccagtcacacagctctatgtcagtgtggatgcc
agcaccaaagagagcctcaagaagattgaccgtccactcttcaaagatttctggcagaga
ttccttgacagtctgaaagcactggaacaaaagcaacaacgaacggtatacagattaact
ttggtgaagtcttggaatgtggatgaagtaaaagcatattctgaattggtctccctaggt
aaacccgacttcatagaggtcaagggtgtgacctattgtggagagagctcagcaagcaac
ctgacgatggctaatataccttggcacgatgaagttctctacttcgttcggcaacttgca
gacctgttgccagactatgaaattgcatctgaacatgaacactcaaattgtctcctgatt
gctcacagaaagtttaaagttgaagggaagtggaggacatggataaattatgaaaggttc
catgagttaatgaaggagtttgagaagagcaatggattaaaaaccttcactgctgaagac
tatacagccgagaccccatcttgggctgtatttggagctaaagaaagaggctttgatcct
gtagaaagtcgcttccaaaggaagaataaagctaaggacatatctggatgttga
DBGET
integrated database retrieval system
