Polypterus senegalus (gray bichir): 120532891
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Entry
120532891 CDS
T08668
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120532891 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120532891 (ttc37)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120532891 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_16
TPR_8
TPR_19
TPR_11
TPR_17
TPR_12
TPR_9
ANAPC3
TPR_6
TPR_15
ChAPs
COG4_N
DUF6765
EST1_DNA_bind
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
120532891
NCBI-ProteinID:
XP_039615296
LinkDB
All DBs
Position
7:complement(144300778..144498099)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSSKEVKSSLKSAREAIKNKEFKDALKHCKAALKIEKNNYNAWVFIGLAAAELEQPEQAQ
TAYKKATELEPNQLLAWQGLTNLYEKSNQTDFKEELPEMYLKLMEFYESTEKQKWYEVCK
KLVELYYQKQKHLEVARAWNKLIKLKQEENVKKDELYQLWIQMIKLLGDGQESQDNEIQQ
QLLGAFENALNLTSEIPSEDHQKLSTEYIRYLSKLPHEEVKLKAACESMLCLYPSLTFPL
EFLSLHFIDKGSCDEDAVNCYSRLLEMDSSNGPGHIGIGIKAFKENNYQLASDSLTVGLK
KLSSSLRGWHTLAMTQLKMHRYEDCVDSCIQGLNLGERDNKWKKKFLKLKAEALVKCSKD
KCAEEAMETLEQVSDIGNDPQLIALKARINLRRGQIDQALKMTASLLVSHPDIAEVYALR
GNIHFQQQEYQLAEKQFQKAIQLDPSSGNYHYCLGMVYWYMGEETRRDKTKAQTNLLKAA
KLDAYLGPVFRYLGHFYRDIAADKVRARGCYKKAFEIDRYDAESGAAAVDLSMELDDMNS
ALAILKSVTEHASAGTAKWAWLRRGLYYLKINQYTQAIADLQAALRADPKDSVCWECIGE
AYLNRRGFTAALKSFTKANELNPESIYNIYQIAAIKQTLGKCKEAANEYMQIIKRKEDYV
PALKGLGECYLSMAQSALKDYLDGRAVCYLEKAMQYISRAVQHRPDLSCLWKLLGDICTQ
IHIVSPTRGNLKMSPLPNTSNSNKQVQNLNKIQILKMGGRFYGRALKLLPESANLWCDLG
INYYRQAQCVFIDQGENGINEILEKSLQCLKKSVMLDSGNHYYWNALGVIAMCKGIENSA
LAQHSFIKSVQAEANNVVAWTNLGVLYQKHENIELAHKAFKVAQSLEPSYVRCWIGQALI
AEAVGSYETMDLFRHTTELSVHTEGVKGYAHWVCSTLLDKSNRNSELYLYNIVQMNAISS
AQVALTKYTERIQIDAAAFTMLGYLNEHLNLKQQAVKAYQSAFQILQTTGEKEKLIFALG
NYGRSLCTIGHYNQAIQAYTSTQLSDLDDITGLALAYFKSGLLQESITVYEKALMLAKTE
KEKAYILISLALLEHKQKKVDGAKTLLFKCSMLKEPAIESLLSLCALGLVNRDATLATAA
LNEINKRVNQKDAVYDRCLLLCAIFALQGNNAGVQKQLAKAVHSHPGDPMLWSLLSRVVP
QYYPKNSKGGIVAGSVACHFSLTHGKKALLYSGVNQLAAGIHSGKSQSNNALKTIQKVAL
LCPDNPAVWAALMAACHLENTACYLSGSESKKLGLEKMLLNAVSEKVKAAGDFQSSLNQE
LDQWSVCQAVSGLKQAGQNSEAESLCSKVLSIQPEQPPLYLLLRQIQCEQLLHLQKKLPE
VVLEELKKAVMSNFASVSAWHWLADVYKSQGLMVAAVMCYRQSLQVASQQGNVSGKLSSL
LRLALLGLSLCMAHISGTEWKDLVQEATGEAMKIACCPLAVLIQALLQFCIKMGARETRR
LLERVVYQPGCPDSIVSVARWYLLRHLHAKNDEQLIDTLLDHARDHSDSRLDAFYKKLCS
SS
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtaaagtcttcactgaaaagtgctagggaggctatcaaaaataag
gagttcaaagatgcactgaagcactgtaaggcagctttgaagatagaaaagaataactac
aatgcttgggtgtttattggattagcagcagctgaacttgagcaaccggaacaagcacag
acggcttacaaaaaggctacagagttggaaccaaatcaattgcttgcatggcaggggttg
acaaatctgtatgaaaaaagcaatcaaactgactttaaagaagaattgcctgaaatgtat
cttaaactaatggaattttatgagagcacagagaagcaaaagtggtatgaagtatgcaag
aaattggtggaactctattatcaaaagcaaaaacacctggaggttgcaagagcgtggaat
aaactaattaaattaaaacaagaagaaaatgtgaagaaagatgagctttaccaactgtgg
atacaaatgataaagctattgggtgatggccaagaaagccaggacaatgagatacagcaa
caattgctaggagcgtttgaaaatgccttgaatttaacatccgaaattccaagtgaagac
catcaaaagctttccacagagtacatcaggtacttatcaaagttgccgcatgaagaagtg
aagctgaaagctgcttgtgagtccatgctatgcctctacccttcattgacttttcctctc
gaatttcttagtctgcactttatagacaaaggtagctgcgatgaagatgctgtaaattgc
tactcaagattattagaaatggactcaagtaatggaccaggacatattggtattggtatc
aaggccttcaaagaaaataattaccaactagcttctgacagtttaactgttgggctaaag
aagctgagttctagtttacgtggttggcatactttagcaatgacccagctgaaaatgcac
agatatgaagattgtgttgattcttgcatccaaggtttaaatctaggtgaaagagataac
aagtggaaaaagaagtttcttaaattgaaagccgaagctttagttaaatgtagtaaagac
aaatgtgcagaggaagctatggaaactctggagcaggtatcagatattggcaatgatcct
caactaattgcactaaaggccagaattaatttaaggaggggacaaattgatcaagcatta
aagatgacagccagtctcttggtttcccatccagatattgctgaagtatatgccttgagg
ggtaatattcatttccagcaacaggaatatcagctggctgaaaaacagtttcagaaagcc
atacaactggacccttcttctggaaattaccattattgtcttggcatggtttactggtac
atgggggaagaaacaagaagagataagaccaaagctcagaccaatctgcttaaagctgca
aagctggatgcttacttaggtccagtatttcgttatcttggccacttctacagagacata
gctgctgacaaagttcgagccagaggctgttacaaaaaagcctttgagatagacagatat
gatgcagaatctggggcagcagcagtggatcttagcatggaacttgatgatatgaattct
gcccttgcaattctgaaatctgtaaccgaacatgcaagtgctgggacagctaagtgggca
tggctaagaagaggactttactacctgaaaataaaccaatatacacaggccattgctgat
ttacaggctgccctgagagctgacccaaaggattctgtctgttgggagtgtataggagag
gcttatttgaacagaaggggtttcacagcagcactgaaatcatttaccaaagctaatgag
ttgaatccggaatctatttacaatatataccagattgcagccatcaagcaaactctagga
aaatgcaaagaagctgctaatgaatacatgcaaataattaaaagaaaagaggattatgtt
cctgcattaaaaggtctgggtgaatgttacttgtccatggcacaaagtgctcttaaagac
tacctggatggaagggctgtatgctatctggaaaaagccatgcaatacatttctagagct
gttcaacatcgtccagacctttcatgtctttggaaactccttggtgatatctgtacccaa
attcatattgtctctccaacaagaggcaaccttaaaatgtccccacttccaaatacttca
aattcaaacaaacaagttcaaaatttgaacaaaattcaaatattgaaaatgggaggaaga
ttctatggccgagcattaaagcttttaccagagtctgccaatttatggtgtgaccttgga
ataaactactaccgtcaagcacagtgtgtatttatagaccagggtgaaaatggtatcaat
gagatactagagaaatctttgcagtgcctcaaaaaatctgtgatgctggacagtggaaac
cactattattggaatgcacttggggtaattgccatgtgtaaaggtattgaaaattctgct
ttagcacaacattcatttatcaaatctgtgcaggccgaagcaaataatgttgtagcttgg
acaaatctaggggttttataccagaagcatgaaaatattgagcttgctcacaaagctttt
aaggtagcccagtctttggaaccgtcttatgttcgctgttggatcggccaggctcttatt
gctgaagcagttgggagttacgaaaccatggatcttttcagacacaccacagagctgagt
gttcatactgaaggagtgaagggatatgctcactgggtttgttcaacacttttggataaa
agtaataggaactctgagctgtacctctacaatattgtgcaaatgaacgctatttcttca
gcacaagttgctttgacaaaatatacagaaagaatacagattgatgctgctgcatttacc
atgcttggatacctcaatgaacatctaaatttgaaacagcaggcagtaaaagcttaccaa
agtgcttttcagatactacagaccacaggagaaaaagagaagttaatatttgcccttgga
aattatggcagaagtctctgtaccattggtcattataatcaggctattcaggcttataca
tcaactcaactcagtgacctagatgacatcactggattagcacttgcttatttcaagagt
ggacttttgcaagaaagtatcacagtgtatgaaaaagccttgatgctggcaaaaacagaa
aaggagaaggcatatatacttatatccttggctttacttgaacacaagcaaaaaaaggtg
gatggtgcgaaaacactgctttttaaatgttccatgttaaaagagcctgcaattgaaagt
cttctgtcactttgtgccttgggactggtcaacagagatgctacacttgccacagctgcc
cttaatgagattaacaaacgtgttaaccagaaggatgcagtttatgatcgatgtctgctc
ttgtgtgccatttttgctctccaaggcaacaatgcaggtgtacagaaacaattagctaaa
gctgttcacagtcacccaggtgatcctatgttgtggtctctactatctagagtggttcct
cagtactaccccaaaaattccaaaggaggcatagttgctggaagtgtggcctgccatttc
agtttgactcatgggaagaaagcactcttgtatagtggagtgaatcagctagcagcaggt
attcactctggtaagagccagtctaataatgctctgaagaccattcagaaggtggcactg
ctctgtccagataatcctgctgtgtgggctgctttaatggctgcttgccaccttgaaaat
acagcctgctatctgagtgggtcagagagcaaaaaattagggttggagaaaatgcttcta
aatgcagtttcagaaaaggtgaaagctgcaggtgattttcagtcatcactgaatcaagag
cttgaccaatggtcagtatgtcaagcagtatcagggctgaaacaagcaggccaaaattca
gaagctgagtcactgtgtagcaaggtgctgagtatccagccagaacagccccctttgtat
ctcctccttagacagatacaatgtgagcagctactacatttgcaaaagaaacttcctgaa
gttgtattggaggaacttaaaaaggcagtgatgtccaattttgcctctgtatctgcatgg
cattggctggcagatgtgtacaaaagtcaaggcctaatggtagctgcagttatgtgttac
cgtcagagcctacaggtggcatctcagcagggtaatgtcagtgggaagttgtccagtcta
ctgaggctagcacttcttggtttatcactctgtatggcacatatttcaggcactgaatgg
aaggacttagtgcaagaagccactggagaagcaatgaagattgcctgctgtcctttagca
gttcttattcaagcacttctacagttttgcattaaaatgggagcaagggaaacacggcga
cttttggaaagagtggtgtatcagcctgggtgccccgattccattgtttcagttgcacgc
tggtatcttcttagacatctgcatgctaaaaatgatgagcagctcattgatacattactg
gaccatgcaagagaccacagtgacagccgattggatgctttctataaaaaactttgctct
tcatcttag
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integrated database retrieval system
