Polypterus senegalus (gray bichir): 120534138
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Entry
120534138 CDS
T08668
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04010
MAPK signaling pathway
psex04260
Cardiac muscle contraction
psex04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120534138
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120534138
04261 Adrenergic signaling in cardiomyocytes
120534138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120534138
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120534138
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120534138
NCBI-ProteinID:
XP_039617392
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Position
8:complement(95102244..95793138)
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AA seq
1107 aa
AA seq
DB search
MYTSWITVLIMIVSLSVTSSPSAGEHFPSQQTIKLWVEKMQEDLVTLAKTASGVEQLITI
FNKNRDSYTVETNNAQQLVQSASRNIENLLLNRSKALETLATEAEKFQMDHQWKNEFAEN
EIVYYNAKDSLNYDSNETAEQRRIKPEFKEDPSFKRLISYNHTAVHIPTDIYEGSTIVLN
ELNWTAALDEVFKKNREEDPTLLWQVFGSATGLARYYPASPWIDSQKTLNKIDLYDVRRR
PWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVSFNADAKNV
SCFNHLVQANVRNKKVLKDAIQDISAKGITDYKKGFRFAFEQLSNYNVSRANCNKIIMLF
TDGGEEKAQEIFEKYNPDKKVRVFTFSVGQHNYDKGPIQWMACENKGYYYEIPSIGAIRI
NTQEYLDVLGRPMVLADKKAKQVQWTNVYLDALELGLVITGTLPVFNKTKELKDGSYKQN
QLILGVMAIDVSLEDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKTIGVGIPKIYS
AKRRPVFQNPKFQEPVTLDFLDAELENDIKVEIRQKMIDGEKGNITISTLVKSQDERYID
KGNRTYTWAPVNGTDYSLALVLPSYSMYYIKAKIEDTITQAKSKKAKPKVSETLKYDNFD
EYGHTFIAPRQYCKDLKMSDNNTQFLLDFNEFIDRKTPNNPSCNAILVNRLLLDAGFTAD
LVKYWKNQNPRGVLARFATTDGGITRVYPKSSGEEWAENAETYESSFYKRSLDNGFYIFT
APYFNRTGGSGYESGIMVSRAVEITIDGKLLKPAVVGVKINVTSWMENFTKATIRTDCKN
EICDCERNNKFVDCVILDDGGFLLMSNQDDHIAQIGRFFGEIDPSLMKSLIKNSLYSFNK
SYDYQSVCDPEKDMKTAAGLRSVYVPTIADILNIGWWATAAAWSILQQLFVSFTLPNFLE
AADVEDEMSSAMSKQSCITEQTQYFFDDNNTSFNGFLDCGNCSRLYHAEKLSNTNLVFLI
VDSKETCLSCDSSLLMQAEQTSQGPDPCILAKTPRYRKGPDVCFDYDEKEDYRDCGGVSG
LSPSLWSMIGIQLVLLWLLAGSRHYPS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtatacctcctggataaccgtcttaattatgatagtttctctatctgtaacgagcagc
ccttctgcgggggaacactttccttcgcaacaaacgataaagttatgggttgaaaaaatg
caggaagaccttgtcacactggccaaaacagcgagtggagttgaacaacttattacaatc
ttcaataaaaaccgggactcatacactgtggaaacaaataatgctcaacagttggtacag
agtgcttcacgaaacatagaaaacttgctgttgaacaggtcaaaagctttggagactctt
gcaacagaagcagaaaaatttcaaatggatcatcagtggaaaaatgaatttgcagagaac
gagatagtctactacaatgcaaaagacagtttaaattatgattcaaatgagactgctgaa
caaaggaggatcaagccagagttcaaagaggacccttccttcaaacgccttatttcctac
aatcacactgctgtccatatcccaacagacatctatgagggctccactattgtgttgaat
gaattaaactggacagcagcactggatgaggtttttaaaaaaaacagagaagaagatcct
accttgttatggcaagtgtttggcagtgcaacgggtctggcacggtattatccagcttca
ccttggattgattcccagaaaacacttaacaagattgacctctacgatgtccgtcgtcga
ccatggtacattcaaggagctgcatcgccaaaagacatgctgattcttgtagatgtgagt
ggaagcgtctcaggcctgactctaaagctcattcggacatctgtctctgaaatgctggaa
accctttctgatgatgactatgtgaatgtagtgtctttcaatgctgatgcaaagaatgtc
agctgctttaaccatcttgtgcaagccaatgttcgcaataaaaaagtcttaaaggatgcc
attcaggacatttcagcaaaaggaatcacagattataaaaagggctttcgatttgccttc
gagcagctatcaaactataatgtgtctcgagcaaactgtaataagatcataatgttattt
actgatggaggagaagagaaggcacaagagatatttgaaaaatacaatccagataaaaaa
gtacgtgtattcacattctctgttggtcaacacaactatgacaaaggaccgattcagtgg
atggcttgtgagaataaaggatattattatgaaattccatctattggagcaatacggatc
aatacacaggaatatcttgatgtgttgggaaggccgatggttttagctgataaaaaggca
aaacaagtgcaatggacaaacgtgtacctggatgctctggaacttggtctagtgatcaca
ggaacattgccagtgttcaataaaacaaaagaactcaaagatggctcttataaacagaac
cagttaattttgggagttatggcgattgatgtatctcttgaagatatcaaaaggctcact
ccacggttcacaattggcccaaacggttactactttgccattgatccaaacggatatgtt
ttgctgcacccaaaccttcagccaaagacgattggtgtaggcatcccaaagatttattct
gcgaaaagaaggccagttttccagaatccaaaattccaggagccagtaacgttggatttt
ctggatgctgaactggaaaatgacatcaaggttgagattcgacaaaaaatgatagatgga
gaaaaggggaatattaccataagtacacttgtgaagtctcaagatgagcggtatattgat
aagggaaacagaacatatacctgggctcctgtgaatggaacggattacagcctggctctg
gtattaccttcatacagtatgtactacattaaggccaaaattgaggataccatcacacag
gcaaaatccaaaaaggccaaaccaaaggtttctgaaactctaaaatatgacaattttgat
gaatatggacacactttcatcgctcctagacaatactgcaaagatttgaagatgtcggac
aacaatacccagttccttttggattttaatgaatttattgacaggaaaacaccgaacaat
ccatcatgtaatgccatactggttaaccgacttttgctggatgctggatttacagctgac
ctggtaaaatactggaaaaatcaaaatcctcgaggagttcttgctaggtttgctactaca
gatggcgggatcacaagagtttacccaaaaagttcgggagaagaatgggctgaaaatgct
gaaacctatgaatctagcttttacaagcggagtttagataatggattttatatctttact
gcaccctacttcaacagaactggtgggagtggatatgaatccggaattatggtgagcaga
gcagtggaaattaccattgatggtaaacttctaaagcctgcagtggttggagtaaagatt
aatgtaaccagctggatggaaaacttcacaaaagcaacaataagaactgattgcaagaat
gagatttgtgactgtgaaagaaataacaagtttgtagactgtgtcattttggatgatggc
ggctttctcctaatgtccaatcaagatgatcatattgcccaaattggcaggttctttgga
gagattgatccaagtctgatgaagagtctgattaagaactccttgtattcttttaataag
tcatacgattaccagtctgtatgtgacccagagaaagacatgaaaactgctgctggtttg
cgttctgtttatgtgcctacaatagcagatattttaaatattggatggtgggcaacagct
gcagcatggtcaatacttcagcagttatttgtaagctttactcttccaaatttccttgaa
gcagcggatgttgaagatgaaatgtcatcagcgatgtcaaaacagagttgcattacagaa
caaacacaatatttctttgacgataacaatacttcatttaatggatttctggactgtgga
aattgttccagattataccatgcagaaaagctgtccaatacaaatctggtatttctgatc
gttgatagcaaagaaacctgcctatcctgtgattccagcctcttgatgcaagctgagcag
acatcccaaggcccagatccatgtatcttggccaaaaccccacggtacagaaaaggacca
gatgtctgctttgattatgatgagaaagaggattatagggactgtggtggtgtctctgga
ttgagtccatcactctggtccatgattggaatccaacttgtgctgctctggctcctagct
ggatcaagacattacccatcatga
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