Polypterus senegalus (gray bichir): 120536504
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Entry
120536504 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120536504
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120536504
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
FACT-Spt16_Nlob
MutS_III
Motif
Other DBs
NCBI-GeneID:
120536504
NCBI-ProteinID:
XP_039620832
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All DBs
Position
10:2989682..3007479
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AA seq
576 aa
AA seq
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MASAQLSLSTDQYSHYCSVCLEGLKVPVTILCGHSYCMECINKYWDQSGLMGTYRCPQCR
MEFNPRPKLHKNTTLINLIGQLKENGVIRASPQGNAEPARVLCDFCTVQKRRASKTCMTC
MASYCEKHLQPHLDLAAFKRHKLEEPTENLEEKLCPKHQRVLEIFCRTDEICICSVCALT
EHKNHDTKILDEEITERKSQLEKTTQEVKRRVLEKMKKVSDLKETAKRIKISAEKEEKEH
KENLKSMLQSIERLKSEVGEAIRDHKQGELSKVGGVIEQLEKEITELRKTESELANLSKT
DDHMQLLKMFHNILVPPGDGCTPDIIVNEDFLPETLKKKLSAAKKSLEEIRDFVKRNKTG
PQVSNDALQNPSRNDFVKYARSLTLDLNTAHKRLHLSEEKKKVTCGEKEMRYHAHADRFN
TWQQILCREALWRICHYWEVEWSGDKAEIGVTYRGIGRKGAGNECVLGLNDKSWSLSCSE
AGVSAWHNNQKTDISVPISHRIGVYLDCPGRSLSFYSISDTMTLLHKFKASFTEPLFAGF
RVRTNCSVTICPLNRSVRRLASSAGHATSSVSQAMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctcaactgtctctgtccactgatcagtactcacactactgttcagtgtgt
ctggagggcctgaaagtgccagtcaccatcctgtgtggacacagctactgtatggaatgc
attaataagtactgggatcagtcaggcttaatggggacttacaggtgtcctcagtgcaga
atggaatttaatccaaggccaaagcttcacaaaaatacgactctcataaatctgatagga
cagttaaaggaaaatggagtcatcagagcttcgcctcaaggtaatgcagaacctgccagg
gtgctctgtgacttttgcacagtgcaaaaacggagagcttcaaagacctgcatgacctgt
atggcctcctactgcgagaaacacctgcagccacacttggacttggcagccttcaagaga
cacaaactggaggagccgactgaaaacctggaagaaaagctctgcccaaagcaccagaga
gtcctggagatattctgtaggaccgatgagatctgcatctgctcagtgtgtgcgttaacc
gaacacaagaatcacgacaccaagatacttgatgaagagataactgagagaaagagtcag
ctggaaaagacaacacaagaagtgaaaaggagagtcctggagaaaatgaagaaggtgtcc
gatctgaaggagactgcaaagaggattaagatatctgcagaaaaagaggagaaggaacat
aaggagaacctcaagtcaatgcttcagtccattgagaggctgaagtcagaggtcggtgag
gccattagagatcacaaacagggcgaactgagtaaggttggaggtgtcatcgagcaactg
gagaaggagatcacagagctcaggaagacagaatctgagctggccaacctttcaaagacc
gatgaccacatgcaattgctgaagatgttccataatatccttgtccctcctggtgatggt
tgtacaccagacataattgtaaatgaagatttccttccagagactctgaagaagaaactg
tctgcagcaaagaagagtttggaggagatcagggattttgtgaagaggaataagacaggc
cctcaggtttcaaatgatgccctgcagaacccaagtaggaatgactttgtaaaatatgcc
cgttctctcaccctggacctcaacacggcgcacaaacgcctgcacctctctgaagagaag
aagaaggtgacatgtggggagaaagagatgcgatatcacgctcatgctgacagattcaat
acctggcagcaaatcttgtgcagggaagccctgtggaggatctgccactattgggaggtc
gagtggagcggagacaaagctgaaattggagtgacatacagaggaataggaaggaaagga
gcgggtaacgagtgtgtcctcggactgaatgacaagtcctggagtttgagctgctctgaa
gctggggtctctgcgtggcacaataaccagaagactgacataagcgtccccataagtcac
agaataggagtgtatctggactgtccagggaggtccctttcattttatagcatctccgac
accatgaccctgctgcacaagttcaaagcctccttcaccgagccgctctttgcggggttt
agggttcgaacaaactgcagtgtgacaatctgccctctaaaccggtctgtccggagactg
gcttcgtctgcaggtcacgccacgtcttctgtgtcacaggccatgttttaa
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