Polypterus senegalus (gray bichir): 120536508
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Entry
120536508 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120536508
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120536508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
Baculo_IE-1
zf-ANAPC11
TRAF6_Z2
zf-RING_4
Fmp27_WPPW
Motif
Other DBs
NCBI-GeneID:
120536508
NCBI-ProteinID:
XP_039620836
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All DBs
Position
10:3144643..3155192
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AA seq
634 aa
AA seq
DB search
MRLKVNFLLQSDSHVIVSQRQCAPPFGLSDNASEPRLSDCQSTPVCPALPKVTGDGGESF
SFISQVPLRTREFGCAFMMAAPQLSVSTDRYSCSVCLEVLKEPVTIPCGHSYCMLCINNY
WDQSKGEGTYNCPQCRRTFNVRPEINRNTVLTEIIETLKEERVDASPSQSYAGPDDVPCD
VCPVRKRSAVKTCMISYCETHLQPHKEHGAYKRHKLEEPTGNIEEKLCAKHQKVLEIFCR
TDGTCVCLLCVVTDHKSHDTVTPEEERAEKQSLLKKREDEMKRKVKMKEKTLKKMKKTRM
RIQSSAESEVEGHEKTFNSVLESIERLKSDVVEMIREYETMELRKTDKIIEEVGTEIKEM
KKRTIELVELLQTGDHIHFLKKFPSFCDPPAKGDVPSLTLHEDFLPETLQRNLSDLKRSL
EEITEWKVVKSTGTGADDSGPVLQNLRCRSHLLKYFRPLTLDPSTAHRRLCLSEGNRKVI
CQETEGPCPDHPNRFDYWEQVLCREALSGTCYYWEVECSGDEIDFGVAYKGIGRKGNDED
SHLGFNDKSWSLYYSDSGYTFWHDGMEIDISAPYSQLIGVYLDCPAGCLSFFSISDTVSL
LYKLKTNFTEPLYPAFGLGWHSSVTICPLKQLDK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgaaggtaaacttcttgttgcaaagtgactcccacgtgattgtcagtcaacgc
cagtgtgccccgcccttcggcttgtcagacaacgccagtgagccccgcctttcggattgt
cagtcaacgccagtgtgccccgcccttccgaaagtcaccggcgacggcggcgagtctttc
agtttcatttctcaggttccgttacggacgcgggagtttggatgtgcgttcatgatggca
gcacctcagctttccgtctccactgatcgatactcctgttcggtgtgcctggaggtcctg
aaggagcccgtcaccatcccgtgtggacacagctactgtatgctttgtattaataactac
tgggaccagtcgaagggagagggcacctataactgtcctcagtgcaggagaacatttaac
gtgagaccagagattaacagaaacaccgtattaacagaaataatcgagacactgaaggaa
gagcgagttgatgcgagtccatctcagagttacgccggaccggacgatgtcccctgtgat
gtttgtccagttagaaaacggagcgccgtgaagacctgcatgatctcctactgtgagact
cacctgcagccacacaaggagcatggcgcctacaaacgacacaaactcgaggagccgacc
ggaaacatcgaagagaaactctgcgcaaaacaccagaaagttctggaaatcttctgtagg
accgacgggacctgcgtctgcttactgtgtgtggtcaccgatcacaaaagtcacgacacg
gtgacacctgaagaggaaagagcagagaaacagagtctgttgaaaaagagagaggatgaa
atgaaaaggaaagttaaaatgaaagagaagacactgaagaagatgaagaagaccagaatg
aggattcagagctctgcagagtcagaagtggagggacacgagaagaccttcaattctgtg
cttgagtccattgagagactgaagtcggatgtcgttgagatgattagagaatacgagacg
atggaactgagaaagacagacaagatcatcgaggaagtggggaccgaaatcaaggagatg
aagaaaagaaccatagagctggtcgagcttttacagacgggcgaccacatccactttctg
aagaagttcccatctttctgtgatcctcctgcaaagggagacgtgcctagtctaactctt
catgaggattttcttcctgagactctccagaggaacctttctgatctgaagaggagtctg
gaggagatcactgaatggaaggttgtgaagagcactgggaccggagctgatgattcaggg
cccgtcctgcagaatctgaggtgtcgaagtcaccttttaaaatacttccgtccactgacg
ctggaccccagcacggcacacagacgcctctgcctgtctgaagggaacaggaaggtgata
tgtcaagagactgaaggtccgtgtcctgatcaccccaacagatttgactactgggagcaa
gtcttgtgcagagaggcgctgagtgggacttgctactactgggaggttgagtgcagtggc
gatgagattgactttggagttgcatacaaaggaatcggcagaaaaggaaatgatgaagat
agtcacctaggattcaacgacaagtcctggagcctttactactctgattccggttatact
ttctggcatgatggcatggaaattgacatcagcgccccctacagtcaactaattggtgtg
tatcttgattgtcctgctggctgtttatcatttttcagcatttcagacacagtgagcctc
ctgtataagctgaagaccaacttcactgagccactgtatccggcgtttgggttaggatgg
cactccagtgtgacaatctgccccctgaagcaacttgacaagtga
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