Polypterus senegalus (gray bichir): 120536510
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Entry
120536510 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120536510
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120536510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
LMBR1
Laminin_II
Wtap
Peptidase_S64
Fmp27_WPPW
DUF4407
DUF1664
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120536510
NCBI-ProteinID:
XP_039620838
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Position
10:3249212..3259863
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AA seq
474 aa
AA seq
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MEASSPQTYTGPDNVSCDICTTGRKRKAGKTCMTCMISYCETHLQPHKEHGAYKRHKLEE
PTGNIEEKLCAKHQRVLEIFCRTDESCICLLCAATEHKTHDMVTPEEEQNGKQNQLKKRR
VKIKERIEEKEKKLEEVKETVVRIKSSTETELQEPEKTFKAVIESIERLRSEVTELIRDY
EQKEVSKAEEFIKLLERKIEALKKRSTELDKLSQTNDPIHFLQKFPNTDIPSEDGDSPDI
RVDDSLLPETLRNDLSDLQKSLEEISSWKFVKIKGVDTPGYILQNFRMRDQFLKYFCPLT
LDPNTTHKRLHLADGNKQVMYKKTEIPYPAHPDRFDYWPQVLCSEPLSGTRCYWEVEWSG
DGGRIGVTYKGVGRKGKNEEFFLGCNDKSWCLVCSSSHCSVSHNRKSITICTLPSNKIGI
YVDYPGGSLSFYSITNKMNLLYKFNVSFTGPLYPGFWVGRNASMKICQLNPSDQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctcttcacctcaaacttacactggacctgacaatgtgtcctgtgacatttgt
actactggaagaaaaaggaaagcagggaagacctgcatgacctgcatgatctcctactgt
gagactcacctgcagccgcacaaggagcatggcgcctacaaacgacacaaactggaggag
ccgactggaaacatcgaagagaaactctgtgcaaaacaccagagggttctggaaatcttc
tgtaggaccgatgagagctgcatctgcttgctctgtgcagcaaccgaacacaagactcat
gacatggtgacacctgaggaagagcaaaatgggaaacagaaccagttgaagaagagaagg
gtgaaaatcaaagaaagaatcgaagagaaagaaaagaaactggaggaggtgaaggagacg
gtagtgaggattaagagttccacagaaacagaacttcaggaacctgagaagacctttaaa
gctgtgattgagtccattgagaggctgcggtcagaggtcactgaactcattagagactat
gagcagaaggaagtgagtaaagctgaggaattcatcaagctactggagaggaagattgag
gcgctgaagaaaagaagcactgaactagacaagctttcacagacaaacgatcctatccac
ttccttcagaaattcccaaataccgacatcccttctgaagatggagattcacctgacatc
agagttgatgacagtttgctgcctgagactctaaggaatgacttgtctgatctgcagaag
agtctggaagagatcagcagctggaaatttgtgaagatcaaaggggtcgacactccaggc
tacatactgcaaaatttcagaatgagagatcaatttttaaaatacttctgtccactcacc
ctggaccccaacacaacacacaaacgcctgcacctggctgacgggaacaaacaggtgatg
tacaagaagacagagatcccgtatcctgctcatcctgacagatttgactactggccccaa
gttctgtgcagtgaacctctgagtgggactcgctgctactgggaggtcgaatggagtgga
gacggaggaaggattggagtgacgtataaaggagttggaaggaaaggaaagaatgaggag
tttttccttggatgcaatgacaagtcctggtgtttggtctgctctagttcacattgctct
gtgagtcataatagaaaaagtattacaatttgcaccctccccagcaataaaataggcatc
tacgtggactatccaggtggctccctttcattttatagcatcacaaacaaaatgaatctc
ctctacaagttcaatgtctcctttactgggccgctctatccgggattttgggttggaagg
aatgccagcatgaaaatctgccagctaaacccatctgaccagtga
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