Polypterus senegalus (gray bichir): 120536524
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Entry
120536524 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120536524
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120536524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
Apolipoprotein
Prok-RING_4
Fib_alpha
zf-RING_6
Gp58
U-box
Col-Pyo_DNase
LMBR1
FUSC
DUF1664
WRC
Motif
Other DBs
NCBI-GeneID:
120536524
NCBI-ProteinID:
XP_039620857
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All DBs
Position
10:3398066..3406898
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AA seq
575 aa
AA seq
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MKRLSVSILQKHRSLVTVCHSGSPFTMAAARPLLSADQFTCSVCLEVLKKPVTIPCGHNY
CLDCINDYWDQSDTMGVNICPQCRRSFNVRPELNRNTVLAEIIEKLNEMQSDVALSQSYA
GPDDVPCDVCPGRKWRAVKTCLTCMASYCESHLQPHREFEALKKHKLGEPTGNLEEKICQ
KHLRVLEIFCRTDETCVCLLCVATEHKSHDTVTPEEERAGRQSQLDKEKKRLRKRIQETE
KRLAEIKESVVKIQRSAQKELQDHEDTFNFLTQIIETLRSKVTETVRDHEWKEVRKAEEL
MEQLENEIKELKKTSAELAQLSHTDDHIHFLKKFPSLCVPMSDGVSPKLTANSDFLPETL
KKDLSELQRHLQEMSGWEFVKSRQTEVKTPSCFQQNMSRNSFLQYACQITLDLNTAQQRL
QLTEQGTRVTCSEIEIPYPDHPDRFDWWTQVLCREALSSSRYYWEVEWSGDGVVIGVTYK
GIGRKGRSKKSSLGDNDISWHLLCFASHWVKEGPPPYRVGVFLDCPAGTVSFYKVTDTMT
LLLKHRASFKEPLYPGFRIKLNSNLKICPLNPSGQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgactttcagtttcgattcttcagaagcaccgctcgcttgtcacagtttgtcac
agtggatctccgttcacgatggcagcagctcgccctttgctgtccgccgatcagttcacc
tgctcggtgtgtctggaagtcctgaagaagcccgtcactatcccgtgtggacacaactac
tgcctggactgtattaatgactactgggaccagtccgacaccatgggggtcaacatctgc
cctcagtgcaggcgatcatttaatgtgaggcccgagctgaacagaaacaccgtactggca
gaaataatagaaaaactgaatgaaatgcaaagcgatgtcgctctgtctcagagttacgcc
ggacctgacgatgtcccctgtgatgtttgcccggggagaaaatggagagccgtgaagacc
tgcctgacctgcatggcctcttactgcgaaagtcacctgcagccacacagagagttcgaa
gctctgaagaaacacaaactgggggagccgactggaaacctcgaggagaaaatctgccaa
aaacacctgagagtcctggaaatcttctgtaggaccgacgagacgtgcgtatgtttacta
tgtgtggcgaccgagcacaagagtcacgacacggtgacacctgaggaggagagagcgggg
agacagagtcaactggataaagaaaagaaacggctgagaaagagaatccaggagacagag
aagagactggcggaaatcaaagagagtgtagtgaagattcagagatctgcacagaaagag
ctgcaggatcatgaggataccttcaacttcctgactcaaataattgagacgctgaggtcc
aaggttaccgagacagttagagatcatgagtggaaagaggtgagaaaagctgaagagctc
atggagcaactggagaatgagattaaggagctgaagaagaccagtgccgagttggcccag
ctttcccatactgatgaccacatccacttcctaaagaaatttccatccctctgtgtccct
atgagtgacggagtctcacctaaactcacggccaattcagatttccttcctgagactctg
aagaaagacctgtccgagctgcagaggcatcttcaggagatgagtggctgggaatttgtg
aagagccggcagacagaagtaaaaaccccaagttgcttccagcagaatatgagtaggaat
tcatttctacaatatgcctgtcagatcacattggacctgaacacggcacaacagcgcctt
cagctgacggaacagggtactagggtgacgtgtagtgagatagagatcccatatcctgat
caccctgacagatttgattggtggactcaagtcctgtgcagagaggccctgagcagcagc
cgctactactgggaggtcgagtggagtggagatggggtggtaattggggtgacatataaa
ggaatcggcagaaaaggaaggagcaaaaaaagtagccttggagacaatgacatatcctgg
catttgctctgctttgcctcccattgggtcaaggaaggtcccccgccctatagagtcggc
gtgttcctggactgtcctgctggcactgtgtcattttacaaagtgacagacacaatgact
ctcctactcaagcacagagcctccttcaaagagcccctctatccagggtttcgcattaag
cttaactccaatttgaaaatctgccctctgaacccctctggccagtaa
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