Polypterus senegalus (gray bichir): 120536941
Help
Entry
120536941 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120536941
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120536941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_5
zf-C3HC4_3
zf-RING_2
TRAF3_RING
Sec10_N
zf-RING_10
Laminin_II
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
120536941
NCBI-ProteinID:
XP_039621450
LinkDB
All DBs
Position
10:complement(23024925..23036729)
Genome browser
AA seq
557 aa
AA seq
DB search
MAEAWLSMLQEMFNCSMCHGILQDPVSTTCGHNFCTNCINKHWDQSDQAEGYKCPQCNEV
FSSRPVLSRNAMLTEVMGKLKQMEVSLPPEESCAGPEDMECDVCTDKKRKAVKYCLTCQA
FFCETHIQPHRNSEAFRKHTLDDPEIDLPDELCLIHGEPIKFFCWTDRLCLCYSCVLTEH
KSHDTAMLETEHVEKRAQLGTAQTEIQQKVQEREKKLEEVLKAAELIKVSAEKKVQDSEA
AFHEVIQSMEEASKKVSELIRDQAEREVKKVEGVKEQLEKEIEELKNRDRELSELALVIN
RIEFLEKFPCPPVPPGDEELLSATICSDISIKELKELLSSLKESMGPVKKCQLLKTTKKG
ESVYIMRFPRSQKDFLKYACQLTLNPCTANEYLWLSEDVRKVTHSTEPCPSFDHPDRFDR
WLQVLCNEGLYKSRYYWEVETVGSRAVIGVAYHSIGRKGGDEDCHLGGNKSSWGLYCSGS
SYSARHDKQETEIIAPYSSRIGVYLDYPSGTLSFYSILDTMTLLHRFEGNFTELLYPGFS
LNCYGSSVTICQVNQQA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcttggctgtcgatgttacaggaaatgttcaactgctccatgtgtcacggg
attctgcaggaccctgtctcgaccacctgtggacacaacttctgcactaactgcattaat
aaacactgggatcagagtgatcaggcagagggctacaagtgtccccagtgcaatgaagtc
ttcagctcccggcctgtcctgtccagaaatgccatgctgactgaagttatgggaaaatta
aaacagatggaggtcagcctcccgcctgaggaaagctgtgcaggtcctgaagatatggag
tgtgatgtctgcactgataagaagcgaaaagctgtgaagtactgcttgacctgccaggcc
ttcttctgcgagactcacattcagcctcatagaaactctgaagcatttaggaagcacacg
ctggatgatccggagattgatctgcctgatgagctctgcttaatacatggggaacccatt
aagtttttctgctggactgatcggctgtgtctttgttacagctgtgtgttgacagaacac
aagagccatgacaccgcaatgctggagacagagcatgtggagaaacgggcccagttaggg
acagcacagactgaaatccagcagaaagtccaggaaagagagaagaaactggaggaggtg
ttgaaggccgcagagttgatcaaggtctccgcagaaaaaaaggtgcaggacagtgaagca
gcattccatgaggtcatccagtccatggaagaggccagtaagaaagtgagtgagctgatc
agagaccaggcagagagggaagtgaagaaggtggaaggcgtcaaggagcaattggagaag
gagattgaggaactgaagaatagagacagagagctgtcagagctggcactggttattaac
cgaatcgaattccttgagaaatttccatgccctcctgtccctcctggagatgaagagttg
ctgtccgccactatctgcagtgacatttctattaaggagctgaaggagttgctgtcttct
ctgaaggaatctatgggaccagtaaagaaatgtcagctacttaaaacaaccaagaaagga
gagtcagtttacatcatgagatttccaagaagccagaaagactttttaaaatatgcctgt
caactcaccttgaacccgtgcacagcaaatgaatacttgtggttgtctgaagatgtcaga
aaagtcacacacagcacagagccttgtcccagcttcgaccaccctgacagatttgatcgt
tggttacaagtcctctgcaatgagggtctgtacaagagtcgctactactgggaagtggag
actgttgggagtcgtgcagtcattggagtagcttaccattcgattgggcgcaaaggagga
gatgaagactgccacctgggaggcaataagagctcctggggcttgtattgttctggttcc
agctactccgcccgccacgataaacaggaaacagaaataattgccccctactcctccaga
atcggggtgtacttggactacccctctggtactctctcgttttacagcatcttagacaca
atgacgcttcttcacaggtttgagggcaacttcactgaactgctctatccaggcttttct
cttaattgttatggctccagtgtgacaatctgccaagtgaaccagcaggcttag
DBGET
integrated database retrieval system
