Polypterus senegalus (gray bichir): 120537489
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Entry
120537489 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120537489
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120537489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120537489
NCBI-ProteinID:
XP_039622398
LinkDB
All DBs
Position
10:118762763..118784583
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AA seq
597 aa
AA seq
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MAEVVLGHICEDQIICSICLEIFTRPVSTPCGHSFCTACIEEFWNRREYYTCPLCEKVFE
KKPELCVNRVLAEIIDNFKETSLISSQEKYAGPGEIECDFCIQRRFRAVKSCLTCLASYC
EAHVRPHYEGAAWKSHKLVNPSKNLQKELCPKHQKAMELFCQTDQEYICLLCMMDEHKTH
DAVTLDTKRAEMQCQIETTQEKILQRIQERQKKIEELKQVMLKIKKFAGTEIWESEKIFT
ELISSIEKSCDRFTALIRDQERTVLKKTEELMHQYEAEINEMKKKKLELADILKTDNHLH
FLKNCTTLCIPDEDKKLSNISMCMTSPSTALRKELSELKNYAKEPFNLEFIQIIQTGSED
EPHNHRSTEPKTTEEIKKCKQELGAQHISDFKTADKIKKRTEDELESVQPPEPKNRDDFL
KYLCHLKMDTKTAHRRLCISDDNKKATLKGNGLPCSDHPESFDCYCQVLCQEGLYGGRFY
WEVEWSGEETTIGVAYKSIQRKGNDGECALGFNNTSWSLFYSDSCYSAWHNNRVTPVTAN
RCSRIGVYLDWPDGTLSFYSVSKTMTLLHTFKTNYTEPLYPAFGVGSSIEICSLKDE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttgtgctgggccacatttgtgaagaccagattatatgctcaatatgcctg
gaaatttttactcggcctgtctctaccccgtgtggccatagcttttgcacggcatgcatt
gaggaattctggaatcggagagagtactacacgtgccctctgtgtgagaaggtatttgag
aaaaagcctgaattgtgtgtaaacagagtgctggctgaaattattgacaacttcaaggag
acctcactgattagttctcaggagaagtatgccggtcctggagaaattgagtgtgatttc
tgcatccaaagacgattcagagctgtgaaatcctgcctgacctgccttgcctcttattgt
gaggctcatgttaggccccactatgaaggagctgcgtggaaaagtcacaaactcgtgaat
ccaagtaaaaacttgcaaaaagaactttgccccaagcatcagaaagccatggagctcttc
tgccaaacggatcaggagtacatctgcttattgtgcatgatggatgagcacaagacccat
gatgctgtcacactggacaccaaaagagcagagatgcagtgtcagattgagacaacacag
gaaaaaatcctgcagcgaattcaagaaagacagaagaaaatagaggagctgaagcaagtg
atgctgaagatcaagaaatttgcaggtacagaaatttgggaaagtgagaagatttttact
gagttaatctctagtattgagaaatcttgcgacagattcactgcgctcatcagagatcag
gaaaggactgtgctaaaaaagacagaggaactcatgcatcaatatgaagctgaaatcaat
gagatgaaaaagaaaaaattagagctggcagatattttaaagacagacaatcatctccat
tttctgaagaactgtacaactctttgtatccctgatgaagacaaaaaactttccaacatt
tctatgtgtatgacatccccatccacggctttacgcaaggaactttctgaacttaaaaat
tacgcaaaggaacccttcaacttagaattcatacaaattattcagacagggtccgaggat
gaaccacataaccatagatctacagagccaaaaaccaccgaagaaataaagaagtgtaaa
caagaactgggtgcccagcacatttcagattttaagactgcagataagatcaaaaagagg
acagaagatgaattggagagtgtgcagccaccagagcccaagaacagagatgacttcttg
aagtatttatgccatcttaaaatggacacgaagactgcacacagaaggctttgcatatct
gatgataacaaaaaagcaacactgaagggaaatggactgccatgctctgatcaccctgag
agttttgactgctattgtcaagtgctttgccaagaaggcctttatggtggtcgcttttac
tgggaggtggagtggagtggggaagaaacaactattggtgttgcctacaaaagcatccaa
aggaaaggaaatgatggtgaatgcgcccttgggttcaacaacacgtcatggagtttattc
tattctgattcctgttactctgcctggcacaataatagagtaactccagtaactgctaac
cgttgctccaggataggggtgtatctggactggccagatggcaccctgtcattttacagt
gtctcaaaaacaatgacacttctacacaccttcaaaacaaactatactgaaccactatac
ccggcatttggagttgggagcagcatagaaatctgttcattgaaagacgaatga
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