Polypterus senegalus (gray bichir): 120538143
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Entry
120538143 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120538143
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120538143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
NBD94
Motif
Other DBs
NCBI-GeneID:
120538143
NCBI-ProteinID:
XP_039623515
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Position
10:complement(29359871..29366549)
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AA seq
293 aa
AA seq
DB search
MENEKSFANLICTIVETQKKVTEHIRKQAKREVERAEGIIEQLEEEVEELRMIQAELTDF
LGTDDHIYFLLGRTFPSVYIPPEDDILPDIVVSTEELRGALFNVKDLEKISKWEVNPDYC
HFTLDPKSTHTNLCLSEKNTVVTWKQDKQIFSDSPHWFDSFFQILSKEGLSGNRFYWEVE
WSETAEIGVTYKRISRKGEGNECCLGCNDKSWSLFCCCSSTSAWHNNQETELNVEASSKI
GVYLDWPAGILSFYNISDTMTLLHSFEADFTEPLYPAFWLLVYTPTIKICAPE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagaagagctttgccaatcttatctgcaccattgtggaaacccagaagaag
gtaactgaacatattagaaagcaagcaaagagagaagtggaacgggctgaaggaattatt
gagcaattggaggaggaggttgaggagctgaggatgatacaagctgagctgactgatttt
ttggggacagatgatcacatctacttccttctggggagaacattcccatcagtgtacatt
ccacctgaagatgatattcttccagatatcgttgtaagtactgaagaattgaggggagca
ttattcaatgtaaaagatttggagaagatcagcaagtgggaagtaaatccagattactgt
cacttcactttggaccctaaatcaacacacacaaatctctgtttatctgagaagaacaca
gtggtgacatggaaacaagataagcaaatcttttcagatagtccacattggtttgactcc
ttctttcaaattctgtctaaagaaggactgtctggaaatcgcttttactgggaagtggag
tggagtgaaactgctgaaattggagtcacatacaaaagaatcagcaggaaaggagaaggt
aatgaatgttgtcttggatgtaatgataagtcatggagtttgttttgctgttgttccagt
acctcagcctggcacaataatcaggagactgaactaaatgtagaagccagtagcaaaatt
ggtgtgtatttggattggcctgctggcattctgtcattttacaatatttctgataccatg
actctccttcacagttttgaagctgatttcactgaaccactgtaccctgcattttggctt
ttggtttataccccaaccataaaaatctgtgctccagaataa
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