Polypterus senegalus (gray bichir): 120539016
Help
Entry
120539016 CDS
T08668
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
psex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120539016 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
120539016 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120539016 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120539016 (gtf2h4)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120539016 (gtf2h4)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120539016 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Swi3
Motif
Other DBs
NCBI-GeneID:
120539016
NCBI-ProteinID:
XP_039624630
LinkDB
All DBs
Position
11:57248960..57384087
Genome browser
AA seq
454 aa
AA seq
DB search
MKLRVHLRCKNLHEFLKELSQHVLDRLYNHPATCLAVFRELPPLAKNYVMRMLFLDQPLP
QAAVSLWIKKDNHKEHEDCTSVLSGLRLWHTQLLPGGLQGLILNPVFKENLRIALLGGGK
AWTDDTTQLGPDKHARDIESLDKYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
ESGEAPCITSAGFQFLLLDTASQLWYFMLQYLKTAEARGMDLVEILSFLFQLSFSTLGRD
YSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLASGVSGTSVDAHTQGFIV
VDTNYRIYGYTESALQIALVALFSEMLCHFPNFVVAQVTRESVQQAIANGITAEQIIHFL
RTRAHPIMLKQVPVLPPTLTDQIRLWELERDRLQFNEGVLYNQFLSQVDFEVLRNHARDL
GVLVWENPQKRLMVVTPAGHSDVKKFWKRQKHTP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgagtgcacctgcgctgtaagaatctccatgaatttcttaaagagcttagc
cagcatgtgttagatcgcctctacaaccatcctgcgacttgcttggcagtgttcagggag
ctccccccactggctaaaaactatgtgatgcgaatgttgtttcttgatcaacctctccca
caagctgcagtctcattgtggattaaaaaagacaatcacaaggagcatgaggactgtacc
tctgtactcagtggtctcagactgtggcacactcagctgctccctggtggtcttcaaggt
ttaatccttaaccctgtctttaaagaaaatctccgcattgcattgctaggaggtggtaaa
gcctggacagatgacacaactcagctggggccagacaaacatgccagagacatcgagtca
ttagacaagtatgccatggaaaggtgggaggtaattctgcacttcatggtgggatctcct
agtgctgctgttagccaggacttggcacagctgcttatccaggctggcctcatgaagagt
gagtctggagaagctccatgcatcacctctgctggtttccagttccttctgttagacact
gcatctcagttatggtacttcatgctgcaatatctgaagacagcagaggctcgaggaatg
gatcttgttgaaatcttgtcatttctattccagctcagtttttccacacttggtagggac
tattctgtggaggggatgagtgactccttacttaactttctgcagcatcttcgtgaattt
ggattggtttttcagcgcaagagaaaatctagacggtactatccaacccgtttagccatc
aacctagcttcaggagtgtcaggcacttcagttgacgcccatacacaaggctttatcgtt
gttgatactaattaccggatatatgggtacacagaatctgcattgcaaattgcattggtg
gcattgttttctgaaatgctttgtcatttcccaaacttcgtggtggcacaagttaccaga
gaaagtgtccagcaggctatagcaaatggcatcactgcagaacagatcattcattttcta
agaacaagagctcatccaattatgttgaaacaggtgcctgtattgcctcctacactaact
gaccagatcaggttatgggagctagaaagagacagattacagtttaatgaaggagtcttg
tacaaccagttcttatcacaagtggattttgaagtactacggaatcatgctagagacctt
ggtgttcttgtttgggaaaaccctcagaagagactcatggtggtcactccagctgggcat
tctgatgttaagaagttttggaaaagacagaagcatacaccttga
DBGET
integrated database retrieval system
