Polypterus senegalus (gray bichir): 120541035
Help
Entry
120541035 CDS
T08668
Symbol
tpcn1
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120541035 (tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120541035 (tpcn1)
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
120541035 (tpcn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Pilin_N
Motif
Other DBs
NCBI-GeneID:
120541035
NCBI-ProteinID:
XP_039628223
LinkDB
All DBs
Position
12:73280594..73340144
Genome browser
AA seq
821 aa
AA seq
DB search
MQEEEMGGELSSLGMDEVCEAPLKHSSYSVDFFSPDGGNYDITNSTLPMPNAGAQNMQTQ
YDILRQSWEMNYQEAAIYLQEGENNDKFFTHPKNPKALAAYLFAHNHIFYMMELTTGLLL
MVLSLCEAPAVPTLRLDVYIHATLELFALVMVAFELCMKLRWLGFQTFIRHKRTMVKTCV
LLLQFVEAVVVLVRQTSHMRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLL
LFFMVIFSILGFYLFSQNPLDPYFNGLENSIVSLFVLLTTANFPDVMMPAYSRSPWSCVF
FIVYLSIELYFIMNLLLAVVFDTFNDVEKMKFKSLLLHKRSAVEHAFHLLVSKQRPNGVC
FKQFDGLMRYYQPRMSARDRYLTFKALNQSGSQVLSLKDFYNFYEVIGLKWKARRSGEHW
FDDLPHTTFLIFKGINILVKSKAFQYAMYIVVAVNGVWILVETFMLQDGSFFSKNVPWSY
IVFLTIYGVELLLKITGLGPLEYFSSGWNLFDFFVTLFAFLGLIVLAFDMEPFYFIVVLR
PLQLLRLFKIKQRYRNVLDTMFELLPRMASLGLTLIIFYYSFAIVGMEFFAGVVYPNCCN
TSTVADSYRLVNYTIGNRTVIEEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGVTSQ
TSHWSRLYFMTFYIVTMVVMTIIVAFILDAFVFRMNYSRKNRDPEDENGIVFDVELNKEE
TDSTLELYKAICTPTSNLSSLQRVLSAMEKNGNPSLVFLGRRSRTKSDLSMRMYEEEMQE
WFAQFALESGIHGEDRSLHNLQASASQTPTADVRQRSLTVN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagaagaaatgggtggagaactctcgtcacttgggatggatgaagtgtgtgag
gctcctttgaagcactcttcttacagtgtagactttttctcacctgatggtgggaactat
gacatcactaacagtactcttccaatgccgaatgcaggggcccagaacatgcagacacag
tatgacatacttcgtcagagctgggagatgaattaccaggaggctgctatatacttgcag
gaaggagagaacaatgataagttcttcacccatccaaagaatcccaaagctctggcagct
tacctctttgctcataatcatatattttacatgatggagctcacaacggggttgcttctc
atggtgctgtctctgtgtgaggcacctgctgtgcctaccctgcgccttgatgtttatatt
cacgccacactggagctgtttgctctggtgatggtagcttttgagctatgcatgaagctg
agatggctaggcttccaaacttttattagacataagaggacaatggtcaagacttgtgtc
ctgctgttgcagtttgtggaagcagtcgtggtgctggtgaggcagacctcccacatgcga
gtgaccagagctctccggccaatttttctggtggactgcagatactgtggagctgtccgc
agaaacctacgccagattttccagtcccttcctcctttcattgacattctgctgctctta
ctatttttcatggttatattctccattttaggcttttatctgttctctcagaatcctttg
gacccatatttcaatggtctggaaaacagcattgttagtttgtttgtcctgttgaccacc
gccaactttccagatgtcatgatgccagcctattcaagaagcccttggtcttgtgtattc
ttcattgtgtacctctccattgagctgtatttcattatgaacttgcttctcgctgtagtt
tttgacacctttaatgatgtggagaagatgaaatttaagtccttgctgttacacaagcga
tcagcagttgaacatgcctttcaccttcttgttagcaaacagaggcccaatggggtttgc
ttcaagcagtttgatgggctgatgaggtattatcagccacgaatgagtgccagagaccgt
taccttacctttaaggcattaaaccagtccgggtctcaagtcctaagcttaaaagatttt
tataacttctatgaagtcattggcttgaaatggaaggcacgaagaagtggtgagcactgg
tttgatgatcttccacataccacctttctcatttttaaagggattaacattctggtgaag
tctaaagccttccagtatgcaatgtatattgttgttgctgttaatggggtctggatcctg
gtggaaacatttatgttacaagatggtagcttcttttcgaagaatgtgccctggagttat
attgtattcctgactatttatggtgttgagttattactgaaaattactggtttgggtccc
ttggaatatttcagttctggatggaatctgtttgatttttttgtcactctatttgctttc
ttgggtctgatcgttctggcttttgacatggagccattttacttcattgtggttcttcga
cctcttcaactgctgaggctgtttaaaataaaacagagatatcggaatgttcttgacacc
atgtttgaactgcttcctagaatggccagcttgggcctgactctcatcattttctactat
tcctttgcaattgtgggcatggagttctttgcaggtgttgtgtatccaaactgttgcaac
accagtacagttgctgactcctaccgtttggttaactacaccattgggaatcgtactgtc
attgaagaaggatactactatctcaacaacttcaacaacattcttagcagttttgtgaca
ctgtttgagcttacagtggttaacaattggtacatcactatggaaggtgtgacgtctcag
acttctcactggagccgcctctattttatgaccttctacattgtcaccatggtggtgatg
acaatcatcgttgctttcattttagatgcttttgtgttccggatgaattatagtcgaaag
aacagggatcctgaagatgagaacggcattgtatttgacgtagaattgaacaaggaggag
actgattctacattggagctctacaaggcaatctgtacacccacatcaaatctgtcatct
ttgcagagggtgctgagtgctatggagaagaatgggaatccctctttggttttcctggga
agaagatctagaacaaaaagtgacctgagcatgagaatgtatgaagaagagatgcaggag
tggtttgcacaatttgcacttgagagtgggatccatggggaagacagatcattgcacaac
cttcaggcctctgctagccagactcctactgctgatgtgcggcagcggtctttgactgtc
aactaa
DBGET
integrated database retrieval system
