Polypterus senegalus (gray bichir): 120543219 Help Entry 120543219         CDS       T08668                                  Symbol traf2a Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism psex  Polypterus senegalus (gray bichir) Pathway psex04010   MAPK signaling pathway psex04137   Mitophagy - animal psex04141   Protein processing in endoplasmic reticulum psex04210   Apoptosis psex04217   Necroptosis psex04621   NOD-like receptor signaling pathway psex04622   RIG-I-like receptor signaling pathway psex04920   Adipocytokine signaling pathway psex05132   Salmonella infection psex05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:psex00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     120543219 (traf2a)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     120543219 (traf2a)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     120543219 (traf2a)   09143 Cell growth and death    04210 Apoptosis     120543219 (traf2a)    04217 Necroptosis     120543219 (traf2a)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     120543219 (traf2a)    04622 RIG-I-like receptor signaling pathway     120543219 (traf2a)   09152 Endocrine system    04920 Adipocytokine signaling pathway     120543219 (traf2a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120543219 (traf2a)   09171 Infectious disease: bacterial    05132 Salmonella infection     120543219 (traf2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:psex03019]     120543219 (traf2a)    04121 Ubiquitin system [BR:psex04121]     120543219 (traf2a) Enzymes [BR:psex01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120543219 (traf2a) Messenger RNA biogenesis [BR:psex03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      120543219 (traf2a) Ubiquitin system [BR:psex04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     120543219 (traf2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 Sina_ZnF SlyX MATH Motif Other DBs NCBI-GeneID:  120543219 NCBI-ProteinID:  XP_039632095 LinkDB All DBs Position 13:complement(3062294..3083523) Genome browser AA seq 557 aa AA seqDB search MAAQDPSPPTSLESVQPGFPRQVLANKLEVKHLCNACLLLLRRPCQAQCGHRYCSFCFKR LVSCGPQKCNACIKEDMFEEPTSILTEGCAFPDNAARREVEGLAAVCPNEGCSWRGTIKE YEAQHEGKCEFALTQCPACGQTIRMNDAERHNERECPERTLNCKYCKEVFHFKSIKAHDE ICPKFPMVCEGCAKKKIPREKYAEHIKFCSKFRAPCRFHVVGCVASVENEKIPEHEQACA YEHLNMLLHYIMGIKVNLEGLQPQSLENASLKIHKLNESMRELEQKLGQLALSPVQGAAQ LVPLMPAAGVELQLLSEKSRVGELSRKVQELELKISTFENIVCVLNREVERSCSTLDAYG RQHRLDQEKIEVLSTKVRQLERSVSLKDLAVAESEGRLRELASATYDGVFIWKISDFSKK RQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGPCDALLKW PFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPSSEMNIASGCPLFCPLSKLDSKNSY IRDDTIFIKAIVDLTGL NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atggcagctcaagacccctctccccctacgtctctggaaagtgtccagccgggattcccg agacaggtcctcgccaacaagctggaggtcaagcacctgtgcaacgcctgcctgctgctg ctgagacggccgtgccaggcccagtgtggccaccgctactgctccttctgcttcaagaga ctggtcagctgcggcccccagaagtgcaatgcgtgcatcaaggaggacatgtttgaagag cccacctctattctcactgaaggctgcgccttccctgacaacgcggcccggagagaagtg gagggtctcgctgctgtctgtcccaacgagggttgcagctggagaggaaccattaaagaa tatgaggcgcagcatgaaggcaaatgcgagtttgcgctcactcagtgcccggcatgtgga cagaccatccggatgaacgacgcggagcggcataacgagcgcgagtgccctgagaggacc ctcaactgtaaatactgcaaagaggtgttccacttcaagagcattaaggcccatgatgag atctgccctaagttccctatggtttgtgaaggctgtgccaagaagaagatccccagagag aagtacgcggagcacatcaagttttgcagtaaattccgagccccctgccgcttccatgtt gtcggatgtgtcgcctcggtcgaaaacgagaagatccctgaacacgagcaggcgtgtgcc tacgaacacctcaacatgctcctccattacatcatgggcatcaaggtcaacttggaaggc ctgcagcctcagagcctggagaatgccagcctgaaaatccataaactcaatgagtccatg agggagctggagcagaagctggggcagctggcgctgtctcccgtgcagggagctgctcag ctcgtgcccctgatgcccgctgccggcgtggagctacagctgctcagcgagaagtcccgg gtgggagagctcagccgcaaggtccaggagctcgagctcaagatcagcacctttgagaac atcgtgtgtgtcctcaaccgtgaagtggagcggtcgtgcagcactctggacgcctacggc aggcagcaccggctggaccaggagaagatcgaggtcttgagcaccaaggtgcggcagttg gagcgcagcgtgagtctcaaggacttggccgtcgccgagagcgaagggcgcctgcgggag ctcgcgtccgccacctacgacggggtcttcatctggaagatttcggacttcagcaagaag cgtcaagacgccgtcgccggccgcgcgccagccatgttctctccagctttctacaccagt aagtacggctacaagatgtgcctgcgcatctacctgaacggcgacgggacgggccgcggg acgcacctctcgctcttcttcgtcgtgatgagaggcccgtgtgacgctctgctcaagtgg cccttcaaccagaaggtgaccctcatgctgctggaccagaacaaccgggagcacatcatc gatgccttccgtccagatgtcacctcgtcctcattccagaggcccagcagcgagatgaac atcgccagtggctgccccctcttctgcccgctctccaaactcgactccaagaactcctac attcgtgatgacaccatcttcattaaggccatcgtggatctgaccggcctctag

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