Aquirufa nivalisilvae: HME7025_02383
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Entry
HME7025_02383 CDS
T05454
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psez
Aquirufa nivalisilvae
Pathway
psez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HME7025_02383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psez03019
]
HME7025_02383
03400 DNA repair and recombination proteins [BR:
psez03400
]
HME7025_02383
Enzymes [BR:
psez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HME7025_02383
Messenger RNA biogenesis [BR:
psez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HME7025_02383
DNA repair and recombination proteins [BR:
psez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HME7025_02383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Drc1-Sld2
Helicase_Sgs1
PBP1_TM
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AWL10224
UniProt:
A0A2S2DXT6
LinkDB
All DBs
Position
2801414..2803735
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AA seq
773 aa
AA seq
DB search
MPIQISNDTLKEHLKKTFGFSQFRGEQEAIIQNTLQGNNSFVLMPTGAGKSLCYQLPAIV
MPGTAIVISPLIALMKNQVDQMIAFGVNAQFLNSSLTRSEMNRVKNEVLSGDVKLLYIAP
ESLNKQENLNFLQQANISFVAIDEAHCISEWGHDFRPEYRKIRAIIESVDEKLPIIALTA
TATPKVQLDIQKTLNLEDAKVFKSSFNRKNLYYEIRSKKDIDKQLIRYIKSHSGKAGIIY
CLSRKRVEEIADLLHVNGIKALPYHAGLDPAIRMANQESFLNEEVEVMVATIAFGMGIDK
PDVRFVIHYDAPKSLEGYYQETGRAGRDSLDGTCILFYTYDDILKLDKFNKDKAVSEKEN
AKLLLAEMVYYANLGVCRRKQLLNYFGEYMAENCGFCDNCLHPTPTFKAEREVVLVLQAI
QETEEKFDAEHIADVLEGKVNQYVQSYDHDKLPVFGAGKTVSWNTQAVDDDDDDDDNEDE
DEDNPTPKKPKLKKKSQKDNHTEDEKSPWISFIKQITIHGYLVKDIENYGVLKLSEKGLN
FIQDSYPVTFSRDHDYEKEAEPDENDEMNAGVGAKAYDDALFELLKNLRKKLAKEKNLPP
YVIFQDPSLEEMATTYPSTQEEMAQINGVGMGKVIKFGKPFLDVINRYVDENEIETAREV
VVKSTVNKSKIKIYIIQQVDRKIDLDDIAYQKELSMAELIEEIEAICYSGTKLNLDYYIN
QVIEPDKQEEIYDYFLSSDTDNITEALDNCNIDDVSEEELRLMRIKFLSELAN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcaaatttccaacgatacgttaaaggagcatctcaagaagacctttggattt
agccaatttcgtggagaacaggaagctatcatccaaaatacgcttcaagggaataatagc
tttgtgctcatgcctactggagcagggaaatctctttgctaccaacttccggcgattgtg
atgcctggaacagccattgttatttcacctttaattgccttgatgaaaaaccaagtggat
caaatgattgcatttggcgtcaatgcccaatttttaaattcatccctcacccgatcagaa
atgaaccgggttaaaaatgaggtcttaagtggtgatgtaaaattattatacattgctcct
gaatccctaaataaacaggagaatctcaattttttacaacaagccaatatctcctttgtg
gccattgatgaagcccattgtatttcagaatggggacacgacttcagaccagaatataga
aaaattcgtgccatcattgaatcagtagatgaaaaactaccgattattgctttgacggcc
actgctacaccaaaagtgcaactcgacattcaaaaaacattgaatttagaagacgccaag
gtgtttaaatcttctttcaatagaaagaacctttactatgaaattcgttccaaaaaggat
attgataaacaactgatccgttacatcaaaagtcattcgggaaaagctggtattatttac
tgcttaagtagaaaacgagtagaggaaattgcagatctattacatgtcaatggcatcaaa
gcccttccctaccatgccggattagatcctgccattagaatggccaatcaagagtctttt
ctaaacgaagaagtagaagtaatggtggcaactattgcttttggtatgggcatcgataaa
cccgatgtgcgttttgtgatacattatgatgctcctaaatctttagaaggatattatcaa
gaaacaggtagagctggtagagatagtttagatggtacttgtatcttgttttacacatac
gacgacatcttaaaactagataagttcaataaagataaagccgtttctgaaaaggaaaat
gccaaattattgttggcagaaatggtgtattatgccaatttgggtgtttgtcgaagaaaa
caattactcaattattttggagaatacatggcggagaattgtggcttttgcgacaactgc
cttcatccaactccaacctttaaggccgaaagagaagttgttttagtcttacaagccatt
caagaaacagaagaaaaatttgatgccgaacacattgctgatgtgttggaaggcaaagtg
aatcagtacgttcaaagttacgatcatgacaaattacctgtatttggggcaggtaaaacg
gtttcttggaatactcaagccgtggacgatgatgatgatgacgatgataatgaggatgaa
gatgaggataatccaactcctaaaaaaccgaaactaaaaaagaagtctcagaaggacaat
catactgaagatgagaagtctccatggatttcattcatcaaacaaattaccattcacggg
tatttggtcaaggatattgaaaactatggcgtcctgaaattaagtgaaaaaggtctcaac
tttattcaagattcttaccccgtaactttctcaagagatcatgattatgagaaagaagct
gagcctgatgaaaatgatgaaatgaatgcgggagttggggccaaagcctacgacgatgct
ttatttgaattattaaaaaacctgcgtaagaaattagccaaggagaaaaaccttcctcct
tatgttattttccaagatccatctttagaagagatggcgactacttatccaagtacccaa
gaagaaatggctcagataaatggagtcggaatgggtaaagtaatcaagtttggaaaacct
ttcttggatgtaatcaatcgttacgtagatgaaaatgagattgaaacggcccgtgaagtt
gttgttaaatctactgtcaataagtctaaaattaaaatttacatcatccagcaagtagat
cgtaaaattgatttagatgacattgcttatcagaaagagttaagcatggctgaattaatc
gaagagattgaagccatttgttattctggtactaaattgaatttagattattacatcaat
caagtcattgagcctgacaagcaagaagaaatttacgattacttcttgagttcggatacg
gataatattaccgaagcattagacaattgcaacattgacgacgtcagtgaggaagagttg
cgtttaatgcgaattaaatttttaagtgaactagccaattaa
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