Pseudocitrobacter corydidari: G163CM_20650
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Entry
G163CM_20650 CDS
T07750
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G163CM_20650 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psgc03400
]
G163CM_20650 (uvrB)
DNA repair and recombination proteins [BR:
psgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G163CM_20650 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G163CM_20650 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
Helicase_C_2
AAA_30
DUF87
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UGS41363
LinkDB
All DBs
Position
complement(2223992..2226013)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLHSAFQPSGDQPDAIARLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESEDLALRVELFDEEVERLSLFDPLTGHVEGTIQR
FTVYPKTHYVTPRERIVQAMEDIKDELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILALG
EGLAKTKTKGRGKSRGGVQIVEADQALTPKALQQQIQSLEAQMLQHAQNLEFEEAAEIRD
KLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaattgcattcggcctttcaaccctcaggcgatcagcctgatgcc
atcgcgcgcctgaaagaagggctggaagatggtcttgcgcatcaaacgctgttgggggta
accggctcggggaaaaccttcaccgtcgccaacgtgattgccgatctccagcgcccgacg
atggtgcttgcgccaaacaaaacgctggcggcgcagctgtatggcgagatgaaagagttt
ttccccgaaaacgccgtcgagttcttcgtctcctactacgattactatcagccggaagcc
tacgttcccagttcagataccttcattgagaaagatgcctcggtgaacgaacacattgaa
cagatgcgtttgtcggcgaccaaagccttgcttgagcgtcgcgacgtcatcgtggtggcc
tccgtgtcggcaatttacgggttgggcgacccggatctctacctgaaaatgatgctgcat
ctgacggtcggcatgattatcgaccagcgcgccattctgcgtcgtctggccgagctgcaa
tacgcgcgcaacgatcaggcattccagcgcggtactttccgcgtacgcggcgaagttatc
gatatcttcccggcggaatcggaagacctggcgctgcgcgttgaactgtttgacgaagag
gtcgagcgcctgtcgctgtttgacccgctaacgggccacgtagagggcaccattcaacgt
tttacggtctatcccaaaacgcactacgtcaccccgcgcgaacgcatcgtgcaggcgatg
gaagatatcaaagacgaactggctgaacgtcgcaaagtgctgctggagaacaacaaactg
cttgaagagcagcgactcagccagcgcacacagtttgacctcgaaatgatgaatgaactg
ggctactgctcgggcattgaaaactactcgcgctatctctctgggcgcgggccgggcgag
ccgccgccgacgttgtttgattaccttccggcggatggcctgctggtcattgatgaatcc
cacgtgaccattccgcaaattggcggcatgtatcgcggcgaccgggcgcgtaaagagacg
ctggtggagtacggtttccgtctgccgtcggcccttgataaccgtccgctgaagtttgaa
gaatttgaagccctcgcgccgcaaaccatttacgtttccgcgacgcctgggaactacgag
cttgagaaatccggcgacgaagttatcgatcaggtggtgcgtcctaccggcctgctcgat
ccggtgattgaagtgcggccggtggcgacgcaggtcgacgatctgctgtcagaaattcgt
ctgcgcacggccattaacgaacgcgtactggtcacgacgctgaccaagcggatggcggaa
gatctcaccgaataccttgaagaacacggcgaacgcgtgcgctatttgcactcggacatc
gacaccgtcgaacgtatggaaatcattcgcgatttgcgccttggcgagtttgacgtgctg
gtggggattaacctgttgcgagaaggcctcgatatgccagaagtgtcgctggtagcgatt
ctggatgccgataaagagggcttcctgcgttccgagcgttcgctaatccagaccattggc
cgtgccgcgcgtaacattaacggcaaggcgattctctacggcgataaaatcacgccatcg
atggcgaaggcgattggtgaaaccgaacgtcgtcgtgagaagcagcagcgctacaacgaa
gagcacggaattgttccgcagggcctgaacaagaaagtggtcgatattctggcgctgggc
gaggggctggcgaaaacgaaaacgaaaggtcgcggtaagtctcgcggcggtgtgcagatt
gttgaagcggatcaggcgctgacgccgaaagcgctgcaacagcaaatccagtcgctggag
gcgcagatgttgcaacatgcgcagaacctggagtttgaagaagccgccgagatccgcgat
aagcttcatcaactgcgtgaattgtttatcgcagcgtcataa
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