Pseudomonas shahriarae: HU773_003975
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Entry
HU773_003975 CDS
T07642
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
pshh
Pseudomonas shahriarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
QXH90049
LinkDB
All DBs
Position
complement(906481..908130)
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AA seq
549 aa
AA seq
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MKTQVVLWKASTALALILAMSLGGCSSGGGGHKSSVASSSPDAGTDGGTGGGDGGGTGGG
TGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGSTTSPL
VTGQIAANLGDTLGNVGTAIGGIGTTVGGVPVVGTTAGGLVTSVGTAVGSIGTGVGDGLG
SLGTNSNSLGVTVAGVANGVADLGTGVSNTGKTLSTTLGGIPVVGGLTGGVGGAAGGLVD
KVGQAVTMLGDTLSTASTTGPLGSVTNTLGGKVLVPVVSLVENTTGNLGKATGLGNPVNG
LLDKVGSTATGLGTQVAGAGGTGNPVTGALGTVLGGVGAVAGTAGGYVAPSAGTGSGSAP
ASGLPELVGGLVANVGNGLNAGNTNGTVSAGGVAGGALGNTVASLGTVIGGNGVANTAAT
APVAGLANNVGAALNPVTSGVSSLTQNIGTSTGIGAPVNGLVTQVGGATSGLGGNITAAN
ANPITNTVGQTVNAVGGAVSSVGGLVTGGTSGSGGGLLGGLNINANATASGSATANTGVG
GLLKGLTGQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcaagtcgtgttgtggaaggcaagtactgcattggcccttattctggcgatg
agcctgggaggctgcagcagtggtggtggcggccataagagcagcgtcgcatcctcctcc
ccggatgccggtaccgacggtggtacaggtggtggtgacggtggcggcactggtggcggt
accggcggcggcactggtggcggtaccggcggcggcactggtggcggtaccggcggtggc
actggtggcggtaccggcggcggcactggtggcggtaccggcggtggcactggcggcggc
actggcggcggtaccggcggtggcactggcggcggcacaggctcgaccaccagccccttg
gtcactgggcagattgcagccaacctgggcgacacgctcggcaatgtcggcacagccatt
ggtggcatcggcacaaccgttggcggtgttccagtagtcggcactacggcaggtggcctg
gtgaccagcgtgggcaccgcggtcggcagcatcggcactggcgtcggcgatggcctgggt
tccctgggcactaacagcaactccctgggcgttaccgtggccggcgtggccaacggcgtc
gccgacctgggcaccggggtttcgaacaccggtaaaaccctgtcgaccaccttgggcggt
atcccagtagtcggcggccttactggcggcgtcggtggggccgccggtggcctggtggat
aaagtcggccaggcggtcaccatgctcggcgataccttgagcactgccagcaccaccggt
cccctgggatcggtcaccaacaccctgggcggcaaagtgctggtgcctgtggtctcgctg
gtggaaaacaccacgggcaatctgggcaaagccactggcctgggcaacccggtcaacggc
ctgctggataaagtcggctctaccgccaccggcctcggcacccaggtggcaggcgcaggt
ggcacaggcaacccggtgaccggtgccctgggcacggtactcggcggtgtcggtgcggta
gcaggcactgcaggtggttatgtcgcaccgtctgccggaaccggcagtggcagcgcccca
gcctccggtctgcctgaactggtgggcggcctggtggccaacgtcggtaacggcctgaat
gcgggcaacaccaacggtaccgtcagtgcgggcggtgtggcaggtggcgcattgggcaac
acggtggcttcgctcggcacagtgatcggtggcaacggcgtcgccaacacggcggcaacc
gcaccggtcgcaggtcttgcgaacaatgtgggcgcggcgctgaaccctgtgacttcgggg
gtcagcagcctgacccaaaacatcggcacctctaccggcatcggtgcaccggttaatggc
ctggtgactcaagtgggcggcgcaaccagcggcctcggtggcaacatcaccgcagccaat
gccaacccgatcaccaacaccgtgggccagaccgtcaacgcagtcggtggagcggtctcc
tcagtgggtggtctggtcaccggcggcaccagcggcagtggcggtggcctgctcggcggc
ctgaacatcaacgccaacgccacggcgtctggatcggccactgcaaacaccggcgtaggc
ggcctgctcaagggcctgaccggtcaatag
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