Pseudomonas shahriarae: HU773_009775
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Entry
HU773_009775 CDS
T07642
Name
(GenBank) hypothetical protein
Organism
pshh
Pseudomonas shahriarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-ProteinID:
QXH91137
LinkDB
All DBs
Position
2129391..2134211
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AA seq
1606 aa
AA seq
DB search
MTQTAKLSQAVQPVTSDELMKALLDSTGDLDKAQVLHETLPAWLVKADPQALQAIEQAYA
DSERPKANLQRLLSRLTPLDAFCTERLTAFLAAKGHTQLDIENDSLELPRRTFRGVNPDL
GGMLVQTVTLEKHSLLQAAMQNFSQAGAEPGGIPINAVVRVGAKRRVAQDISAQTFIGYC
RELNLGEAYQTHVREVFNLTDPDGGYSPAVRTMGQSRCMDMLIDLQIAYAKGDIDQPTRE
LLLGLVKADMPASSTRQLWFNNQPLTWQGLNIDGACLWGVLVFSGASPDGFSNGPIVVYM
PNEPVRPWYRYVSLEQFKLYLSLKLHVSRYRHFFMGYLDESERFGFFQRFEQYNLLVRVE
PLPVTDNFSTFFFNAGVGKIQIDARVLAVPNAQADDDARRQRTQDYLDAGLTVLNVAAFV
VPVLGQLMTGVAVGQLLGEVFEGVDDWVHQDKLGALRHLTNIAENLAAMALFAAGAKVAG
RLWRTTPPASGFYERFEAVRMPDRTTRLWRSRTEPYRHTVSLEGTVASPRGVYQAHGQSY
VNVDGSTYSVVFDSGTGRWRARHPQRDSAYRPPLVHNYQGGWQFSFEQPQEWQNPDYVLG
RLDPSLGTLPAGHLRDIAAITDATLPRLQQIARQNLPLPERLRERALRFRQNQEVRDLIW
QMEHQAPLDAATTRVQMLALPLMEGWPQGRFFELLDEQGYLLERHPDTAPFDYEDLSIHI
TTGHLKHGQVLSSLLEALDPEETARLLGGTFPPEEAQEVLARRLTASLKDNHQAVYERLR
ADVDFPDQTDHGVLKHRYPQLPIRLAWEIMTQASTAERWRLRDTGRVPLRIAQWVRETLE
ILNEDDALSGLYLPELATDATRRIALGLLPRVPGWPEDVLMQIRQESLDGSVMGQVGNAS
AATTRTLVQSNLGWRAYNGQGAPLGPMAEGPEGFYEALLNSLPPAELDQLQLPASGRASH
LRNSLIGKAQDERRRISRYLWPERPVPEDPPVSCVQAMPVEPPRQPAGLVRKVRKLYPLF
DERRIATFLQDLGHDPLSRAKAVRALEQQYEALHRTLKVWAREGGGQGRSDVALRDYRLA
RHQAVQLIERSWQYASLIPDESHRQVPNLSLDGMVIGALPTLPPEVKFEHVRQLSLRNMG
LNDDVGYFLKHFKGLNTLELTDNQVTRLPEVLQQMKHLRRLYLANNQLQLTEYTRTKLGD
LRGLTVLDLSNNPLVDPPLVSNMFELRHLVLRNCRLQRLPSGFMRLPYLEHLDLRENDLA
TLPQWLFEVPRQHAEIINLRHNPLDSPSRLLLQNYRDTLGVGMGFMEDDIARLNEQTARD
LWLGDERMARYAERVETWTGLKDELGSDALFKLLAGLGSVADTSHVQEDMGRRVWRVLDA
AAMDARLREEIFERAATPLNCDDAAAVSFSNLEVLVEIHQASQRVVGGQVTAKPLLRLAK
GLFRLDRLEHMARSHSAEHPMLDPLEVSLAYRTGLAGRFHLPGQPRHMRYASLGGVTEHM
LTLAEMQLKMAELSPQLLKYVVKLPFWSSYLRRIHSGSFDTLNRPFGERVEAVWAQRETL
ADADYRSQMSQIQDEQEKAELAELERLTHEALKLDDLGTCELTPAV
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacagcaaagctgagccaggctgtgcagcctgtgacctcggacgaattgatg
aaggcgctgctggacagcaccggcgacctggataaagcgcaggtcttgcatgaaacgttg
cccgcctggctggtcaaggccgatccccaggcactccaggccattgagcaggcgtatgcc
gacagcgagcggcccaaggcaaacctgcaacggctgctgagccgtctgacccctctggac
gcgttctgtaccgaacgcctcacggcgtttctggccgccaaaggccacactcagctggat
atcgagaacgactcgctggagctccccaggcgtaccttcaggggagtcaatccggacctg
ggcggcatgctggtgcagaccgttaccctggagaaacacagcctgctgcaagcggcgatg
cagaatttttcccaggccggggccgaaccgggaggcataccgatcaatgccgtggtccgc
gttggggcaaagcgcagggttgcgcaagatatcagcgcccagacatttatcggctactgc
cgcgagctgaatctgggggaggcctatcaaacccatgtgcgcgaggtgttcaacctgacg
gacccggacggcggttatagcccggcggtgaggacgatgggtcagtcccggtgcatggat
atgctgatcgacctgcagatagcctatgccaaaggcgatattgatcaaccgacccgtgag
ctgttgctgggcctggtcaaggcggacatgcccgccagcagcacccggcagctgtggttc
aacaaccaaccgctgacctggcaaggcttgaacatcgacggggcgtgcctgtggggcgtg
ctggtgttttccggcgcctcccccgatgggttttccaacggcccgatcgtggtgtacatg
cccaatgagcccgtgcggccgtggtaccgctacgtgtccctggagcagttcaagctttac
ctcagcctcaagctccacgtgagtcgttatcgacacttcttcatgggctacctggacgag
tccgagcgtttcggtttttttcagcggtttgagcagtacaacctcctggtgcgcgtagaa
ccgctacctgtaacggataatttttcgacgttcttttttaatgccggtgtcggcaaaatc
cagattgatgcccgtgtgctcgccgttcccaatgcccaggccgatgacgacgcacgccgc
cagcgcacccaggattacctggatgcgggcttgacggtactcaacgtcgccgcgtttgtg
gtgccggtactgggccagttgatgacgggcgtggcggtcgggcaactgcttggggaagtg
ttcgaaggggtggatgactgggtacaccaggacaaactcggtgcccttcggcacctgacg
aacattgctgagaacctcgcggccatggcgttgttcgcggcgggtgcaaaagtggccggc
cggctctggagaaccacgccgccggcttcggggttttacgaacggttcgaggcggtgcgc
atgccggatagaaccacgcgcttgtggcgcagccgcaccgagccgtaccgccacaccgtt
tcgctcgaagggacggttgccagtccccgtggggtctaccaggctcacggccagtcctac
gtcaatgtcgacggttcgacctactcggttgtctttgactccggtaccggccgctggcgg
gcccgacatccgcagcgtgattcagcgtatcgaccgcccctggtccacaactaccagggc
ggttggcagttctcgttcgaacaaccgcaagaatggcagaacccggactatgtcctgggc
cgactggaccccagcctcggtacccttccagccgggcatctgcgggatatcgccgccatc
actgacgcgaccttgccccgcctgcagcaaatagccaggcaaaacctgccattgccggag
cgcttgcgcgaacgtgcgctgcgcttcaggcagaatcaggaggttcgcgacctgatctgg
cagatggagcatcaggcaccgctcgacgcggcgaccacgcgtgtgcagatgctggccctg
ccgctgatggaaggctggccccaggggcggtttttcgaactgctggacgagcaggggtac
ctgctggagcgtcatcccgacaccgcgcctttcgactacgaagacctgagcatccacatc
accacggggcatctgaaacacgggcaagtcctgtccagcctactggaggccctcgacccc
gaggagaccgcgcgcctgctcggcggcaccttccctccagaagaggcgcaagaggtgctg
gcgcggcggctgaccgcttcactcaaggacaatcaccaggcggtttacgaaaggctgcgt
gccgatgtcgactttcccgaccagaccgatcacggcgtgctcaagcatcgctatccgcaa
ctgcccattcggcttgcctgggaaatcatgacccaggcctccacggccgagcgttggcgg
ctgcgcgataccgggcgggtgcctttgcggatcgcccaatgggtgcgggagaccttggaa
atacttaacgaagacgatgccctgagcggtctgtacctgccggaactggccaccgacgcc
actcggcgtatagcgctggggttactgccgcgggttccgggctggcccgaagatgtgttg
atgcaaatacgccaggagagcttggacggcagtgtcatggggcaggtgggcaacgcatct
gccgccaccactcgcacgctggtccagtcgaacctggggtggcgcgcctacaacggacaa
ggtgcgccgctggggccgatggccgagggcccggaggggttctatgaggcgttgcttaac
agtttgccccccgctgagctcgaccagctgcagttgcccgcgagcggcagggccagccat
ttgcgcaatagcctgattggcaaggcccaggatgagcggcgccggattagccgttatcta
tggccggaacggccggtgcccgaagatccgcctgtgtcgtgcgtgcaagcaatgcccgtg
gagccgccgcgacaacccgccggcctggtgcgcaaggtccgcaagctctaccccttgttt
gatgagcggcgcatagcgacctttttgcaggacttgggtcacgatccgctgtcccgggcc
aaagccgtgcgtgctcttgagcagcaatatgaagcactgcatcgaacgctcaaggtgtgg
gccagggaggggggcgggcaggggcgctcggacgttgccctgcgggactaccgcctggcc
cgtcaccaggccgtccagctcatcgagcgcagttggcaatatgcctcgctgatcccggat
gagtcccatcggcaagtcccgaatctttccctcgatggcatggtgatcggggcattgccg
accttgccgcccgaagtcaagttcgagcatgttcgccagttgtcgttaaggaacatgggg
ctcaacgatgatgttggttacttcctcaagcatttcaaaggcttgaatactctggagttg
acggacaaccaggtgacacgactgccggaagtgctgcagcagatgaagcaccttcgtcgg
ctgtacctggccaataaccaactgcaactgacggaatatacgcggaccaaactcggtgac
ctgcgagggttgacggtattggacctgagcaacaaccccctggtagacccgccgctggtc
agcaacatgtttgagttgcgtcacctagtcttgcgcaattgccggcttcagcgcttgccc
tccggctttatgcgtctgccttatctggagcacctggacctgcgggaaaatgatctcgcc
accttgccgcagtggttgttcgaggtgccacgccagcacgctgaaatcatcaacctgcgc
cataacccgctggactcccccagccgcctgctgttgcagaactaccgggacacccttggc
gtgggcatgggctttatggaggacgatatcgcccggctcaatgagcagaccgcccgggac
ttatggttgggggatgagcgcatggcgcgctacgccgagcgggtcgagacctggaccgga
ctcaaggatgagctgggctccgacgctctgttcaagctgctggccggcctgggcagtgtc
gcagatacctcccacgtgcaggaggacatgggccgccgggtctggcgcgtgctggacgcc
gcggcgatggatgcccggctgcgcgaagagatctttgaacgggcggccacgcccctgaac
tgtgatgatgctgctgcagtgagtttcagtaacctggaagtgctggttgaaatccaccag
gcttcgcagcgggtggtgggcggtcaggtcacggccaagccgctcttgaggctggccaag
gggttgtttcgcctcgaccgactggagcatatggcccgcagccatagcgccgagcacccg
atgctggatccgctggaggtcagcctggcttatcgcaccgggttggccgggcgctttcat
ctgcccgggcaaccccgccatatgcgctatgccagtctcggtggggtgaccgagcatatg
ctgacgctcgctgaaatgcagttgaagatggctgagctttctccgcagttgttgaagtat
gtggtgaagctgccgttttggagcagttatctgcggcgcatccatagcggttcattcgac
accctgaaccggcccttcggtgagcgcgtcgaggcggtgtgggcgcagcgagagacgctg
gctgacgccgactaccggagtcagatgagccagatacaggatgagcaggaaaaggcggag
ctcgccgagcttgaacgcctgacccatgaggcgttgaaactcgacgacctgggcacctgc
gagctaacgccggccgtttga
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