KEGG   Pseudomonas shahriarae: HU773_021755
Entry
HU773_021755      CDS       T07642                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU773_021755
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pshh02022]
    HU773_021755
Two-component system [BR:pshh02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HU773_021755
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA FleQ Mg_chelatase AAA_2 MCM AAA_3
Other DBs
NCBI-ProteinID: QXH88255
LinkDB
Position
4876630..4877964
AA seq 444 aa
MLNAVIVVDDEASIRTAVEQWLSLSGFEVQLFSRAEDCLAKLPRDFPGVILSDVRMPGLS
GLELLAEVQRRDTDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLASLRRALDK
RGLILENRRLHQQADHRAQLESTLLGVSRSLQNLRRQVLDLAGLPVNVLIRGETGSGKEL
VARCLHDFGPRAKKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYANGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIKVDLRIIAATKPDLLDEARAGRFRED
LAYRLTVAQLRLPPLRERREDIPLLFDHFTQIAAERLGRETVPLNGPQLGQLLSHDWPGN
VRELANVAERQVLGLGEPEPEGIEAGQSLAAQQEAFEAHCLKAALTRHKGDIKAVLAELQ
LPRRTFNEKMQRHGLTREMFLSMD
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgctgaacgcggtgatcgtggtcgatgacgaggccagcatccgcacggccgtggaacag
tggctgagcctctccgggttcgaggtgcagttgttcagccgtgccgaggactgcctggcc
aagctgcccagggatttccccggggtgattctcagcgacgtgcgcatgccgggcctcagc
ggcctggagctgctggccgaggtgcaacggcgcgataccgatttgccagtgatcctgctg
accggccatggcgacgtgccgatggccgtcgaagccatgcgcgacggcgcctacgacttc
ctcgagaaacccttcagccccgacgccctgctcgccagcctgcgccgggccctggacaaa
cgcggactgatcctggaaaaccgccgcctgcaccaacaggccgatcatcgcgcccagttg
gagtcgaccctgttgggggtgtcgcgcagcctgcagaacctgcggcgccaggtgctggac
ttggccggtttgccggtcaatgtgctgatccgcggcgagaccggcagcggcaaggaactc
gtcgcccgttgcctgcatgacttcgggccccgggcaaagaagccatttgtcgcgctcaac
tgtgcggcgattcccgagcaactgtttgaagccgaactgttcggccatgaaagcggcgcc
ttcaccggcgcccagggcaagcgcatcggcaagctggagtacgccaacggcggcacgttg
tttctcgacgaaatcgaaagcatgcccctggcccagcaggtgaagctgctgcgggtgttg
caggaacagaaactggagcgtctgggttccaaccagagcatcaaggtcgacctgcgcatc
attgcggccaccaagcccgacctgttggacgaagcccgcgccgggcgttttcgtgaagac
ctggcctaccgcctgacggtggcacaactgcgcctgccaccgttacgcgaacgccgcgaa
gatatcccactgctgttcgaccactttacccagatagccgccgaacgcctgggccgcgag
accgtgcccctcaacgggccgcaactggggcagttactgagccatgactggccgggcaac
gtgcgcgaactggccaacgtcgccgaacgccaggtgctgggcctgggcgagccggagccg
gagggtatcgaggccgggcaatccctggcggcgcagcaggaggcattcgaggcccattgc
ctgaaagccgcgctgactcggcataagggcgatatcaaggcggttctggccgaactgcaa
ctgccacggcggaccttcaatgaaaagatgcagcgccatgggctgacccgggaaatgttt
ttgtcgatggattga

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