Plesiomonas shigelloides: SAMEA2665130_0123
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Entry
SAMEA2665130_0123 CDS
T04378
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00521
Streptomycin biosynthesis
pshi00523
Polyketide sugar unit biosynthesis
pshi00541
O-Antigen nucleotide sugar biosynthesis
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01250
Biosynthesis of nucleotide sugars
Module
pshi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA2665130_0123 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA2665130_0123 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA2665130_0123 (rmlC)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SAMEA2665130_0123 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
SBT59707
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Position
1:136678..137229
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AA seq
183 aa
AA seq
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MQVKPGRLSGLFHIYPQVYRDERGYFLEVFEKRRYQTLLGITDEFVQDNRSYSAAGVIRG
LHFQQHYPQGKLIRVVSGAVFDVAVDLRADSATFGQWESMVLSADDQAQLWIPPGFAHGF
AVLSPQGAEVEYKCTGYYHAGDERCLRWDDPALQIPWPVETPILSEKDQQGLTLEALRAC
GCC
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaagcccggccgattatccggtctatttcatatctatccgcaggtctatcgc
gatgagcgcggttattttctggaagtgttcgaaaagcgccgttatcagacgttactgggg
atcactgacgaatttgtgcaggataatcgttcctattcggcggccggtgtgatccgtggt
ctgcattttcaacagcactatccgcagggaaaattgatccgagtagtcagtggcgcagtg
tttgatgtggcggtggatctgcgcgctgattcggcaacctttggccagtgggagagcatg
gtgctgtcggccgatgatcaggcgcagctttggatcccgccaggctttgcgcatggcttt
gccgtactttcgccgcagggcgcggaagtggaatacaaatgcacgggttattatcatgct
ggcgatgagcgctgtttgcgctgggatgatccggcgctacagatcccgtggcccgttgaa
acgccaatcttatcggaaaaagaccaacagggtctgacgctggaggcgttacgcgcatgc
gggtgttgctga
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