Plesiomonas shigelloides: SAMEA2665130_0124
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Entry
SAMEA2665130_0124 CDS
T04378
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00521
Streptomycin biosynthesis
pshi00523
Polyketide sugar unit biosynthesis
pshi00541
O-Antigen nucleotide sugar biosynthesis
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01250
Biosynthesis of nucleotide sugars
Module
pshi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA2665130_0124 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA2665130_0124 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA2665130_0124 (rfbD)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
SAMEA2665130_0124 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
SBT59708
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Position
1:137214..138173
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AA seq
319 aa
AA seq
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MRVLLTGKNGQLGQVLCAVAPAEWELLACDRQTLDITHPEQVQQCVRQWRPDLIINTAAF
TQVDAAESAPHAAWQANVVGPAQLARAAGDVGATLLHFSTDYVFAGQNAASRALANDVVE
VFNETDTPQPINYYGYSKWQGELQVLEILPQARVIRTAWLFSPCGRNFVRTMLHLALRQP
VLRIVNDQRGCPTSALQLARFLPALTAPSLPGGIYHLAGSPAVSWFEFAEAIFRCALACG
WPAARLPRIEPIASAAFAQAAPRPSSSILCSERSRAALCAQLPAEDAASLTLDWRLSLPE
VVRTLLRSDPELQEVCASS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgttgctgaccggaaaaaatggccagcttgggcaggtactttgcgctgtcgct
cctgctgaatgggagctgttggcctgcgatcggcaaacgttggatattacccatcctgag
caagtacagcagtgtgtccggcagtggcgaccggatctgatcatcaatactgccgctttt
acgcaggtggatgcggccgaaagtgcgccgcatgccgcgtggcaggccaatgtggtggga
ccggcacagttggcgcgtgccgcaggtgacgttggcgcgactttactgcatttttcgacc
gactatgtgtttgctggccaaaacgcagcaagccgcgcgctggcaaatgacgtggtcgag
gtatttaacgaaaccgacaccccgcagcccatcaattattacggttacagtaaatggcag
ggtgagctgcaggtgctagagatcctgccgcaggctagggttattcgcaccgcgtggtta
ttcagcccatgtggccgtaattttgtgcgcacgatgctgcatctggcgctacgtcagccg
gttctgcgcatcgttaatgatcaacgaggctgtccgaccagcgcattgcagttagcccgc
tttctgcccgcactgacagcgccgtctttgccgggggggatttatcatctggccggctcg
cccgcggtcagttggtttgaatttgccgaagcaatttttcgttgtgcgctggcatgtggc
tggccggctgcgcgtttacctcgaattgagcccattgcatcagctgcgtttgctcaagct
gcgccgaggccgtccagtagcatattgtgtagcgagcgctcgcgggcggcgctgtgtgct
caattaccggcagaggacgctgcctcactgacattggattggcgtttgtctctgcctgag
gtagtacgcaccttgctgcgtagcgatcctgaactgcaagaggtctgtgcctcgagttga
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