Plesiomonas shigelloides: SAMEA2665130_0583
Help
Entry
SAMEA2665130_0583 CDS
T04378
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA2665130_0583 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_0583 (xseA)
Enzymes [BR:
pshi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA2665130_0583 (xseA)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA2665130_0583 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Dip
Motif
Other DBs
NCBI-ProteinID:
SBT60147
LinkDB
All DBs
Position
1:complement(634667..636004)
Genome browser
AA seq
445 aa
AA seq
DB search
MQENRPIFTVSRLNQAVRLLLESQLTQIWISGEISNLSMPVSGHWYFTLKDLQAQVRCAM
FRTSNRKVTFRPQNGQQVLVRANVTLYEPRGDYQLVVEGMQADGAGDLQQQFEQLKMQLA
AEGLFAQSAKKPLPEHPKQVGIITSASGAALQDMLQILQRRDPMLPVVIYPVMVQGNEAP
AQIIRALTLANARRECDVLIVGRGGGAREDLLAFNNEAVARAIFASQLPVISAVGHETDV
TIADFVADLRAPTPSAAAELVSRDQQAQLTRLSQSQHRLQQAAIRQLQRQQQHLERLQHR
LLRQHPQARLQRQQMQLDDLQHRLQQATERLLQRQQQRTDSLLHRLHTQTPRQRIDRSQQ
QLDQLTARLSQQTQHLLHQHGQALGLLGARLQAVSPLATLARGYAVVQDEQRQLITSVQQ
VQAGDSLQIRLSDGVVHSRVERTRE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagaaaaccgtcctatcttcactgtctctcgcctcaatcaggcggtacgtttactc
ctcgaaagccaactgacacaaatctggatcagcggggaaatctccaacctttcgatgccc
gtttctggccattggtacttcacgctcaaagacctgcaagcgcaagtccgctgcgccatg
ttccgtaccagcaatcgcaaagtaacctttcggccgcaaaacggccagcaagtgttggtt
cgggcgaatgtcactctgtatgagccgcgtggcgattatcagctggtcgtggaaggtatg
caggccgatggggccggtgatttacagcagcagtttgagcagttgaaaatgcagctggcg
gcagaaggattatttgcccaaagcgctaaaaagccgctgcccgagcatcccaagcaagtg
gggatcatcacctccgccagtggtgccgccttgcaagatatgttgcaaatcttgcagcgc
cgcgatccgatgctgccggtagtgatttatccggtgatggtgcaaggtaacgaggcgccg
gcgcaaattatccgagcgcttacgctagcaaatgccagacgggagtgtgatgtgctgatt
gtcgggcgcggcggtggagcacgggaagatttgctggcgtttaacaacgaagcggttgca
cgagcaatttttgccagccaactaccggtgatcagcgccgttggccatgaaaccgatgtc
accattgccgattttgttgccgacctgcgcgcgccaacgccgtccgccgcagcagaatta
gtcagtcgcgaccagcaagcgcagctcacgcgcctaagccagagccagcatcgcttacaa
caagctgcgatacgccagctacagcgccagcagcagcatctggagcgcttacagcaccgt
ttacttcgccaacacccacaagcgcgtctacagcgccagcagatgcagctggatgattta
caacatcgcctacagcaagccacagagcgactgttgcaacgccagcagcagcgtactgat
agcctgttacatcggctgcatacccaaacgccacgccagcgcatcgatcgcagccaacaa
cagctcgatcagctcacggctcgcctgtcacagcaaacgcaacacctgctgcaccagcat
ggacaggccttgggcctactcggcgcacgtctgcaggcagtcagcccactggcaacgctg
gctcgtggctatgcagtggtgcaagacgaacagcgccagctcatcacctcggtgcagcaa
gtgcaggccggagatagcctgcaaattcgtcttagcgacggcgtggtgcacagccgcgtc
gagcgtacccgcgagtaa
DBGET
integrated database retrieval system
