Plesiomonas shigelloides: SAMEA2665130_1853
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Entry
SAMEA2665130_1853 CDS
T04378
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_1853 (rluC)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SAMEA2665130_1853 (rluC)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA2665130_1853 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
SBT61362
UniProt:
A0A1A9AYN4
LinkDB
All DBs
Position
1:complement(2039275..2040237)
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AA seq
320 aa
AA seq
DB search
MKEINTKVQILTVADDEAGQRIDNYLRTRLKGVPKSLLYRILRKGEVRVNKKRIKPEYKL
QAGDEVRVPPIRVSEKEEAPVSAKLTRVAALADCILYEDDGLIVLNKPSGTAVHGGSGLS
FGVIEGLRALRPEARFLELVHRLDRDTSGILLVAKKRSVLRDLHEQLRVKTVQKDYLALV
RGQWQKHCKVVQAPLMKNVLQSGERIVRVSAEGKPSETRFEVVERFEQATLVKASPVTGR
THQIRVHTLHAGHPIAFDDKYGDRDFDAQVAASGLNRLFLHAAAIRFRHPQTGQEMLIEA
PLDGILKRTVQYLRNQRGSY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaattaatacaaaagtacaaatactgaccgttgccgatgatgaagcgggtcag
cgaattgataattatctgcgcactcgtttgaagggcgttccgaaaagtttgctgtaccgc
atcctgcgtaagggggaagtgcgggtaaacaaaaaacgcatcaagccggagtacaaatta
caagccggagatgaagtgcgcgtgccgccgattcgggtttcagaaaaagaagaagcgccg
gtatctgccaagttgacacgtgttgctgcgttagccgattgcatcttatatgaagatgac
ggtctgattgtgctcaataaaccgtcaggcactgccgtgcatggtggtagtgggctgagt
tttggtgtgattgaaggtttacgtgctctgcgcccagaagcgcgctttttggagctggta
catcgtttggaccgagacacatccggtatcttgttagtggccaaaaaacgttcggtattg
cgcgatctgcatgagcagctgcgtgttaaaaccgtgcagaaagactatttggccttagtg
cgtggtcagtggcagaagcactgtaaagtggtacaagcgccgctgatgaaaaacgtgctg
caaagtggtgagcgtattgtacgggtgagcgcggaaggcaaaccgtcagaaacacgcttt
gaggttgtggagcgttttgagcaggcaaccttggtaaaagcaagccctgtgactggccgt
actcaccagatccgcgtacacaccttgcatgccggtcatccgattgcgttcgatgataag
tatggcgatcgtgactttgatgcacaggttgcagcgagtgggctaaaccgtctgttcttg
catgcggcggcaatccgttttcgtcatccgcaaactgggcaagagatgctgattgaagcg
ccgctagacggcatacttaaacgcactgtgcaatatttgcgcaatcagcgcggctcatat
tga
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