Plesiomonas shigelloides: SAMEA2665130_2473
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Entry
SAMEA2665130_2473 CDS
T04378
Symbol
cadC
Name
(GenBank) Transcriptional activator CadC
KO
K03765
transcriptional activator of cad operon
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_2473 (cadC)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Other transcription factors
Others
SAMEA2665130_2473 (cadC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CadC_C1
Trans_reg_C
TPR_16
Homez
TPR_8
TPR_15
Motif
Other DBs
NCBI-ProteinID:
SBT61937
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Position
1:complement(2712357..2713967)
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AA seq
536 aa
AA seq
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MRDESYRVGEWLVSAADNKLIRGERVLVVEPRLVDMLCYFSTHPGEVLSRDELIDNIWTR
NVVTPHVVTQCISELRKCLKDGRPDAPEYIVTVPKRGYKLVASVTLCVGDAHVSGYEPPL
AAVPVEPTPEVSAAPVTPAELVNPAASISSAPVSTTEQELYAAAKLACFVPPADTVTQGV
VAPRFSWWKVLGIVLLLSLFAGGSAFLFRPVPDMSPVLMDPNAVSIQWVANPNSVCANTQ
GPISSVNELLAQALNNYSPYNAHDMTNYSGRSLPTAGKTLYTQFENQQHHRVSQCFLSVS
LVNNATRKVLMSKRYIITETNLLTVQVDVLNHVFAVLGLQPPQTLITRLSNVAPQDGHVL
RQYYHAHQLMQSGDVDSLIAARDILQTLLKDYPNFIYARAELLLNNMVLMTLQPSGDAEQ
QRSAIKDELARIVDAPELHGNPIVLQLQALFQLNNGNLAQAQMYAEQAVKLERNWLSYVL
LGKVYELEGLFSDAADAYLSAYNQHPGKGTYYWIKNAIFQSELNAVAPYLNDTTFD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacgaatcctaccgcgtgggcgaatggctggtttctgcagctgacaataagtta
attcgtggcgaacgggtcttggtggttgaaccaagacttgtcgatatgctgtgctatttt
tctacccatccgggagaagtgctcagccgcgatgagctgattgataatatctggacccgc
aatgtggtaacgccgcatgtggtgactcagtgcatctctgagttgcgtaaatgtctgaaa
gatggccggccagacgcgccggaatatatcgtgaccgtgccgaaacgcggttacaagctg
gtggcctcggtcacgttgtgcgtcggtgatgcgcatgtttccggttatgagccgccattg
gctgctgtgccggtagagcctaccccagaagtcagcgcagccccagtcacgcccgcagag
ctggtaaatccagctgccagtatcagcagtgcgccggtgtcgaccaccgagcaagagctg
tatgcggcggctaagcttgcctgttttgtccctcctgccgataccgtaacccaaggtgtg
gttgcgccgcgtttttcctggtggaaagtgctggggattgtcttgctgctgagcctgttt
gccggaggttcagcgtttctgttccgtccagtgccggatatgtcgccggtattgatggac
ccgaatgcggtgtctatccagtgggtcgcgaatccaaacagtgtgtgtgccaatactcaa
gggccgattagtagcgtcaatgaattgctggcgcaggcgctgaataactacagcccgtac
aatgcacacgacatgaccaattacagtggtcgtagtctgccgacggcagggaagacgctg
tatacccagtttgaaaatcagcagcaccaccgcgtcagtcagtgtttcttatcggtttca
ctggttaataacgctacgcgcaaagtgctgatgagcaagcgctacatcattaccgaaacc
aacttactgacggtgcaggtagatgtgctcaaccatgtgtttgcggtgctgggcttacag
ccgccacagactttgattacccgtttgagtaacgtagcgccgcaagatgggcatgtgctg
cgccagtactatcatgcgcaccagttgatgcaaagcggggatgtggactccttaatcgcg
gcgcgcgatattctgcaaaccttactgaaagattacccgaacttcatctatgctcgtgct
gagttactgctcaacaatatggtgttgatgacattgcagccaagtggtgatgcggagcag
cagcgttcggcgattaaagatgagctggcacggatagtggatgcgccagagctgcacggt
aacccgatcgtgttgcagctgcaggcgttgttccaattgaataatggcaatctggcgcag
gcgcagatgtatgctgagcaggcggtgaagctggagcgtaactggctgtcttacgtgctg
ctgggtaaggtgtatgagctggaagggctgttcagtgatgcggcggatgcctatctgtcg
gcgtacaatcagcatccgggcaagggcacctattactggattaaaaacgctatcttccaa
agcgagctcaatgccgtcgcgccttatctgaacgataccacctttgattaa
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