Pseudooceanicola spongiae: F3W81_12395
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Entry
F3W81_12395 CDS
T06866
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq00521
Streptomycin biosynthesis
pshq00523
Polyketide sugar unit biosynthesis
pshq00541
O-Antigen nucleotide sugar biosynthesis
pshq01100
Metabolic pathways
pshq01110
Biosynthesis of secondary metabolites
pshq01250
Biosynthesis of nucleotide sugars
Module
pshq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
F3W81_12395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F3W81_12395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F3W81_12395 (rfbC)
Enzymes [BR:
pshq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
F3W81_12395 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QOL81551
UniProt:
A0A7L9WME6
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Position
complement(2643043..2643606)
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AA seq
187 aa
AA seq
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MDVSATSLPDVLILTPRRFGDDRGFFSESWNAQRMAEAGLDIAFVQDNHSFSEKAGTLRG
LHYQSPPHAQGKLVRCGRGSLFDVAVDFRRDSPNFGKWVGVELSYDNGKQLWIPPGFLHG
FVTREAGTEIIYKCTDYYAADCDGAVRWDDPDLAIDWGVSDPILSAKDAAAATWSAVHTP
FTMENAQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcggccacatcgctaccagacgtattgatcctgacgccccgccggttcggc
gatgaccgcggtttcttcagcgaaagctggaatgctcagcgcatggccgaggccgggctg
gatatcgcctttgtgcaggacaaccattcgttttcggaaaaagccggcacgctgcgcggg
ttgcactatcagtcgccgccgcatgcgcagggcaagctggtgcgctgtggccgtggcagc
ctgttcgatgttgcggtggatttccgccgtgattcgccgaacttcggcaaatgggtcggg
gttgagctgagctatgacaacggcaagcagctgtggatcccaccggggttcctgcatggc
tttgtcacgcgcgaggcgggcaccgaaatcatctacaaatgtaccgactattacgccgcc
gactgtgacggcgcggtgcgctgggacgaccccgatcttgccatcgactggggcgtcagc
gacccgatcctgtccgccaaggacgccgctgccgccacatggtctgcggtccataccccc
ttcacgatggagaacgcgcaatga
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