Pengzhenrongella sicca: J4E96_13105
Help
Entry
J4E96_13105 CDS
T07613
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psic
Pengzhenrongella sicca
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psic03016
]
J4E96_13105
Enzymes [BR:
psic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J4E96_13105
Transfer RNA biogenesis [BR:
psic03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J4E96_13105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QTE28314
UniProt:
A0A8A4Z8Y6
LinkDB
All DBs
Position
2861509..2862819
Genome browser
AA seq
436 aa
AA seq
DB search
MDLEQPAEPVGALDAPVVPPAGGPTNATADDDAPAPLEVIPLVEPADGIPAVIETPEAYA
EVVAAFAAGTGPVGVDAERASGYRYGQATYLVQLRREGAGTALIDPIALPDLSALSDALV
GVEWVLHASSQDLPGLHEQGLRPSRVFDTEVGARLLGLDRVGLAAVVAELLGFGLSKEHS
AVDWSTRPLPEDWLRYAALDVEVLVELRAVMADRLAEAGKAEWAAQEFEALRLAPPALPR
IDPWRRVSGLHAVRDARRLAVVRELWHTRDENARSRDISPGRVLPDHAIVAAAQALPRSV
DQLSALPAFSGKGARRRITLWQQAIDRGLALGDAELPSVRGPRTDAPPPPRAWPDRDPAA
AARLAVAREAVIELSVEHHIPVENLLQPDLLRRLCWSPPPQLDADSIAPVLAAGGARRWQ
VELVTPRLAEAFVTHE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgagcaaccggccgaaccggtcggcgccctcgacgcgccggtcgtcccccct
gcgggtgggcccaccaacgcgacggccgacgacgacgcccccgccccgctcgaggtgatc
cccctggtcgaaccggccgacggcatccccgcggtgatcgagacccccgaggcgtatgcc
gaggtggtcgcggccttcgccgccgggacgggcccggtgggcgtcgacgccgagcgcgcc
tcgggctaccggtacggccaggccacctacctcgtccagctgcgccgcgagggcgctggc
acggcgctgatcgacccgatcgcactgccggacctgtccgcgctgtcggatgcgctcgtc
ggcgtcgagtgggtgctgcacgcgtcgtcgcaggacctgccgggcctgcacgagcagggc
ctgcgaccgtcgcgcgtgttcgacaccgaggtcggcgcgcgcctgctcggcctcgaccgg
gtcggcctcgccgccgtcgtcgccgagctgctcgggttcggcctgtcgaaggagcactcg
gcggtcgactggtcgacgcgcccgctgcccgaggactggctgcgctacgcggccctcgac
gtcgaggtgctcgtcgagctccgcgccgtgatggcggaccgcctggccgaggcgggcaag
gccgagtgggccgcgcaggagttcgaggcgctgcggctcgcgccgccggccctgccgcgg
atcgacccgtggcgccgggtgtccgggctgcacgccgtccgggacgcgcgccgcctcgcc
gtggtgcgggagctgtggcacacgcgggacgagaacgcgcgcagccgcgacatctccccc
gggcgcgtgctgcccgatcacgccatcgtcgccgcggcccaggccctgccccgctccgtc
gaccagctcagcgccctgcccgccttctcgggcaagggcgcccgccgccggatcacgctg
tggcagcaggcgatcgaccgcgggctcgcgctcggcgacgccgagctgccgtccgtgcgg
ggcccgcgcaccgacgcgccgccgccgccgcgcgcctggccggaccgcgaccccgccgcc
gccgcccggctcgccgtcgcccgcgaggccgtcatcgagctgtccgtcgagcaccacatc
ccggtcgagaacctcctccagcccgacctgctgcggcggctgtgctggagcccgccgccc
cagctcgacgccgactcgatcgcgcccgtgctcgccgcgggcggggcgcgccgctggcag
gtcgagctggtcaccccgcggctcgctgaggcttttgttactcatgagtaa
DBGET
integrated database retrieval system
