Pseudomonas siliginis: NF676_01865
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Entry
NF676_01865 CDS
T08569
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00521
Streptomycin biosynthesis
psii00523
Polyketide sugar unit biosynthesis
psii00541
O-Antigen nucleotide sugar biosynthesis
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01250
Biosynthesis of nucleotide sugars
Module
psii_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NF676_01865 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NF676_01865 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NF676_01865 (rfbC)
Enzymes [BR:
psii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NF676_01865 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UST80091
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Position
complement(301858..302403)
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AA seq
181 aa
AA seq
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MNVITTDLPGVLIIEPKVFGDERGFFYESFNAKAFQDATGLDTQFVQDNHSRSQKGVLRG
LHYQLQNTQGKLVRVTAGEVLDVAVDIRRSSPHFGKSVAVRLSAENHRQLWVPEGFAHGF
VVLSEFAEFLYKTTNYYDPSSERSIRWDDPALGIDWQLDAAPKLSAKDQAAALLKDADVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcaccaccgatctgcccggtgttctgatcatcgaacccaaggtgttcggc
gacgagcgcggttttttctacgagagtttcaatgccaaagcgtttcaggacgccaccggt
ctggatacgcaatttgtgcaagacaaccattcgcgctcgcaaaaaggcgtgctgcgtggc
ctgcattaccagttgcagaacacccagggcaaactggttcgcgtgaccgcgggtgaagtg
cttgatgtggcggtggacatccgtcgcagctcgccgcatttcggcaaatcggtggcggtg
cgcctgtcggcggaaaatcatcgtcagctatgggtaccggaaggtttcgctcacggtttc
gtggtgctgagcgagttcgccgaattcctctacaagaccaccaactattacgacccgtcc
tccgagcgcagcattcgctgggacgacccggcgctgggcatcgactggcaactggacgca
gcgccgaagctgtcggccaaggaccaggcggctgcgctgctcaaggacgctgacgtcttc
gcctga
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