Pseudomonas siliginis: NF676_06870
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Entry
NF676_06870 CDS
T08569
Symbol
emhB
Name
(GenBank) efflux RND transporter permease subunit EmhB
KO
K18138
multidrug efflux pump
Organism
psii
Pseudomonas siliginis
Pathway
psii01501
beta-Lactam resistance
psii01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NF676_06870 (emhB)
01503 Cationic antimicrobial peptide (CAMP) resistance
NF676_06870 (emhB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_06870 (emhB)
01504 Antimicrobial resistance genes [BR:
psii01504
]
NF676_06870 (emhB)
Transporters [BR:
psii02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NF676_06870 (emhB)
Antimicrobial resistance genes [BR:
psii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NF676_06870 (emhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
UST81039
LinkDB
All DBs
Position
complement(1445930..1449094)
Genome browser
AA seq
1054 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNSDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLLVIGVVSRDGSMSKDDLSNYIVSNMQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNNFNLTPVDVKNAIAAQNVQVSSGQLGGLPAVQGQQLNATIIGKTRL
QTAEQFKEILLKVNKDGSQVRLKDVAEVGLGGENYAISAQFNGSPASGLAVKLANGANAL
DTAKALRNTIDSLKPFFPQGMEVVFPYDTTPVVTESIKGVVHTLVEAIALVFLVMFLFLQ
NFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKPIPKGEHGTPKKGFFGWFNRNFDRGVRSYERGVGNMLTRKAP
YLLAYLLIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAQRTQVVVDEMREYLLR
PNKDGGEADAVASVFTVTGFNFAGRGQSSGMAFIMLKPWGERNADNSVFKLAARAQQHFF
SFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLMEARNQFLGMAAQSKVLTQVR
PNGLNDEPQFQLEIDDEKASALGITISDINNTLSIALGSSYVNDFIDRGRVKKVYVQGQP
DSRMSPEDLKKWYVRNAEGTMVPFSAFAKGEWVYGSPKLARYNGVEAVEVLGAPAPGYST
GEAMAEVEAIAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSI
PIAVMLVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGR
SLREAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAIGTGVIGGMLTATILA
IFWVPLFFVTVSSIGQRKKTDSDETTETPKEAGQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattcttcatcgaccgtccgattttcgcctgggtaatcgccctggtgatcatg
ctggtcggggcactttcgatcctgaaattgccgatcaaccaatacccgagcattgcgcca
ccggccattgcgatccaggtgacctacccgggtgcgtccgcacaaaccgtgcaggacacc
gtggtccaggtcatcgagcaacagctcaacggtatcgacaacctgcgttatgtgtcgtcg
gaaagtaactccgacggcagcatgaccatcaccgcgaccttcgagcaaggcaccaactcc
gacaccgcgcaggtccaggtccagaacaagctgaacctggccaccccgttgctgccgcag
gaagtccagcaacagggtatccgcgtgaccaaggcagtgaaaaacttcctgctggtgatc
ggcgtggtgtcgcgtgatggcagcatgagcaaggacgacctgtccaactacatcgtgtcg
aacatgcaggacccgatctcgcgcaccgccggtgtcggtgacttccaggtcttcggtgcg
cagtacgcgatgcgtatctggctcgacccggccaagttgaacaacttcaacctgaccccg
gtcgacgtgaagaacgccattgctgcgcagaacgtccaggtgtcgtccggtcagctcggt
ggcttgcctgccgtgcagggccagcaactgaacgcgacgatcatcggcaagacccgtctg
cagaccgccgagcagttcaaggaaatcctgctcaaggtcaacaaggacggttcgcaggtt
cgcctcaaagacgtggctgaagtcggcctcggcggcgagaactacgcgatcagcgcccag
ttcaacggcagcccggcttccggtctggcggtgaaactggccaacggcgccaacgccctc
gataccgccaaagcgctgcgcaacactatcgacagcctcaagccgttcttcccgcaaggc
atggaagtggtgttcccgtacgacaccaccccggtggtgaccgagtcgatcaaaggcgtg
gtgcacaccctggtcgaagcgatcgcgctggtgttcctggtgatgttcctgttcctgcag
aacttccgcgccaccgtcatcaccacgatgaccgtgccggtggtactgctcggtacgttc
ggcatcctcgccgccgccggtttcagcatcaacaccctgaccatgttcggcatggtgctg
gccatcggtctgctggtggacgatgccatcgtcgtggtggaaaacgtcgagcgggtgatg
agcgaagaaggcttgtcaccgaaggaagcgacgaagaaatccatgggccagatccagggc
gcactggtcggtatcgccctcgtactctcggcggtactgctgccgatggcattcttcagc
ggctcgactggtgtgatctacaagcagttctcgatcaccatcgtgtcggccatggccctg
tcggtactggttgccctgatcttcaccccggcgctgtgcgcgaccatgctcaagccgatt
ccgaaaggcgagcacggtaccccgaagaaaggtttcttcggctggttcaaccgcaacttc
gaccgtggcgtgcgcagctacgagcgcggcgtcggcaacatgctgacccgcaaggcgccg
tacctgctggcgtatctgctgatcgtcgtcggcatgatctggctgttcacccgcatcccg
accgcgttcctgccggaagaagaccagggcgtactgttcgcccaggtgcagaccccggcc
ggttccagtgcccagcgcacgcaggtggtcgtggatgaaatgcgtgagtacctgctgcgt
ccgaacaaggacggtggtgaggcggacgcggtggcttcggtgttcaccgtgaccggcttc
aacttcgccggccgtgggcagagctcgggtatggcgttcatcatgctcaaaccgtggggc
gagcgtaacgccgacaacagcgtgttcaagctcgccgcgcgtgcccagcaacacttcttc
agcttccgcgacgcgatggtgtttgccttcgccccgccagcggttctggaattgggtaac
gccaccggtttcgacgtgttcctgcaagaccgcgccggtatcggtcacgaaaaactgatg
gaagcgcgcaaccagttccttggcatggcggcgcaaagcaaggtgctgacccaggtgcgt
ccgaacggcctgaacgatgagccgcagttccagctggaaatcgacgacgagaaggccagt
gccctcggcatcaccatcagcgatatcaacaacaccctgtcgatcgcgctgggcagtagc
tacgtcaacgacttcatcgaccgtggtcgggtgaagaaagtctacgtgcagggccagccg
gattcgcgcatgagccccgaagacctgaagaagtggtacgtgcgcaacgccgaaggcacc
atggttccgttctcggcgttcgccaagggtgagtgggtctacggttcgccgaaactggcg
cgttacaacggtgtggaagcggtcgaggtcctcggggctccggcgccgggctactccacc
ggtgaagcgatggctgaagtcgaagcgattgccaagaagctgccggccggtgtcggtatc
tcctggaccggtctgtcctacgaggaacgtctgtccggctcgcaagcgccagcgctgtac
gccctgtcgctgctgatggtgttcctgtgtctggcggcgctgtatgagagctggtcgatt
ccgatcgcggtcatgctcgtggtaccgctggggatcatcggtgcactgatggctaccagc
ctgcgcggtctgtccaacgacgtgtacttccaggtgggcttgttgacgaccatcggtctg
gcggctaaaaacgccattctgatcgtcgaattcgccaaggaactgcatgaacagggacgc
agcctgcgtgaagcggcaatcgaagcctgccgcatgcgtctgcgcccgatcatcatgacc
tcgctggccttcgttctcggtgttgtgccgctggcgatttccaccggcgccggctcaggc
agtcagcacgcgatcggtaccggcgtgattggcggtatgctcacggccacgatcctggcg
atcttctgggtcccactgttcttcgttactgtgtcgtccatcggtcagcgtaaaaagacc
gactcggatgagactactgaaactcctaaagaggctggccaatga
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