Pseudomonas siliginis: NF676_14380
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Entry
NF676_14380 CDS
T08569
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psii03012
]
NF676_14380 (selB)
Translation factors [BR:
psii03012
]
Eukaryotic type
Elongation factors
NF676_14380 (selB)
Prokaryotic type
NF676_14380 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
bact_SelB_WH_2nd
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
UST82448
LinkDB
All DBs
Position
complement(3108533..3110449)
Genome browser
AA seq
638 aa
AA seq
DB search
MIVGTAGHIDHGKTSLLQALTGQTGDRRPQERERGMTIDLGYLYAELAAGAGLTGFIDVP
GHEKFTHNMLAGAQGIDLVLLVVAADDGVMPQTREHLAIVELLGIPRALVAITKCDRAGA
GRVEEVQRQVLDLLAPGPFADAPIFTVSSVSGQGVDGLRAALLQVRSEVQARGCEGGFRL
AIDRAFSVAGAGIVVTGTALSGTVAVGDKLVLAPAGKSVRIRGLHAQNQAAEQAFAGQRV
ALNLSGERLELTQIHRGQWLLADWLHAPTQRVDIDFQLLPGERTFEHFHPVHLHLGTQDV
IARVALLQGPRLSPGERMFAQLLINAPVHAVKGDRLILRDSSAQRTLGGGVVLDPFAPAR
QRRSPERLAQLQTLGLSVSLEQALPALLNHSPGGLDPQRLERQFNRPRAQWTLADNIRLI
DTRQGPLLFNVQRWGQLKFTLLEQLARFHEQEPDQMGPDRDRLRRFSALTLERSTFISLL
DELLYAGSILASGPWLHLPDHQVRLNADDEILWQQLQPLFEQAGFDPPWVRDAAKMLGED
DASVRLLLRKLARLGLMHQVVRDLFISDIVLRQMAALLLKLAEENPSIQVTTFRDALGLG
RKRCIQYLEYFDRLGLTRRLGESRQIRPDNALADACAP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcggcacggcggggcacatcgaccacggcaagacttcgctgttgcaagcgctg
accgggcaaaccggcgaccgccgcccgcaggagcgcgaacgcggcatgaccatcgacctc
ggttatctctacgccgaactcgcagcgggcgccgggctgaccggcttcatcgacgtgccc
ggccacgaaaaattcacccacaacatgctcgctggtgcgcagggcatcgatctggtgttg
ctggtggtcgcggccgacgacggcgtgatgccgcagacccgcgagcatctggcaatcgtc
gaactgctcggcattccccgcgccctggtggcgatcaccaaatgcgaccgggcgggagcg
ggcagggtggaagaggtgcagcgccaggtcctggacctgctcgcgcccggaccatttgct
gatgcgccgatttttaccgtgtcgagtgtgagcgggcagggcgtcgatggattgcgcgcg
gcgttgttgcaggtgcggagcgaggtgcaggcgcgcggttgcgaaggcggctttcgtctg
gcgattgatcgggcgttcagcgtcgcgggtgcggggattgtggtcacaggcacggcactg
tcgggcacggttgcagtgggtgacaaactggttctggcgcctgccggcaaatcggtacgc
atccgtggcctgcacgcgcaaaaccaggccgccgaacaggccttcgccggtcagcgcgtg
gcgctgaacctcagcggcgaacgtctggaactgacgcagatccaccgtggccaatggctg
ctggcggactggctgcatgccccgacccagcgcgtcgacatcgactttcagctgttgccc
ggcgagcgcacctttgagcattttcacccagtgcatctgcaccttggcacccaggatgtc
atcgcccgcgtcgctttattgcaaggcccgcgtctgagtcccggcgagcgcatgttcgcg
caattgctgatcaacgcgccggtgcacgcggtgaagggtgatcggttgatcctgcgtgac
tccagcgcccagcgcacattgggcggcggtgttgtgctcgacccattcgctccggcacgc
caacgccgcagcccggaacgcctcgcgcaactgcaaaccctcggcctcagcgtcagcctc
gaacaggccctgccggcactgctcaaccacagccccggcggcctcgacccgcaacgcctc
gagcgccagttcaaccgcccgcgcgcgcagtggacgctggcggacaacatccgtctgatc
gacacccgccaaggcccgctgctgttcaacgtgcagcgctggggccagttgaaattcact
ttgctcgaacaactggcgcgatttcacgaacaggaacccgaccagatggggccggaccgc
gatcgcctgcgccgcttcagcgctctgacgctggaacgctcgactttcatcagcctgctc
gacgaactgctctatgccggctcgatcctcgccagcggcccttggctgcacctgcccgac
catcaggtgcgcctgaatgccgacgacgaaatcctctggcagcaattacagccgttgttc
gaacaggccggcttcgacccgccgtgggtacgcgacgcggcgaaaatgctcggcgaagac
gatgccagcgtccgcctgctgctgcgcaaactcgcacgcttgggcctcatgcaccaggtg
gtgcgcgacctgttcatcagcgacatcgtcctgcgacaaatggcggcgctactgctgaaa
ctcgccgaagaaaatccgtcgattcaagtgacaaccttccgcgatgcgctaggcttggga
cgcaaacgctgtattcagtatctggaatatttcgaccgactcggcctgacccgccgcctc
ggcgaatcccgccagatccgccccgacaacgcgctggctgacgcctgcgcaccctga
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