Phocoena sinus (vaquita): 116738744
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Entry
116738744 CDS
T07759
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116738744 (TRAPPC8)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116738744 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
116738744
NCBI-ProteinID:
XP_032458316
Ensembl:
ENSPSNG00000006901
LinkDB
All DBs
Position
14:43067035..43156499
Genome browser
AA seq
1436 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVTSSSEAEPMEQFSKLSQEQHRIQHNNDYS
YPKWFIPNTLKYYVLLHDVSAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTPNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTITSNKNSDSNLLSLDGLDNEVKVDGLPNNFRTHP
LQLDPSGDSSNSIDGPDHVKSASSLHETKKANAGIIHGACLTLTDHDRIRQFIQEFTFRG
LLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAP
ELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRP
YPAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSA
LLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLA
EDHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPD
GPLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEHVVA
VVNRGVLPSNFHPTEYCLNCYSDNSRFPLTVVEEPITVEVAFRNPLKVPLLLTDLSLLWK
FQPKDVSGKENEEVKELVKGEPEMIGTEVVSEFLINSEESKVARLKLFPHHIGELHILGV
VYNLGTIHSSMTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGP
DRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFT
FGGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALISSASSVDFGIGIGSQPEVIPVPL
PDTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAVICTSRSL
NVRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHIVQVSSSSKHWKLQKSVN
LSENKDAKLANREKGKFCFKAIRCKEEEVATQSSEKYTFADIIFGNEQIVSSASPCADFF
YRSLSSELKKPQAQSSLHTEKQSIEDTMRLIQKCNEVDLNIVVLWKAYVVEDSKQLILEG
QHHVVLRTIGKEAFSYPQKQEPPEMELLKFFRPENTIVSSRPSVEQLSNLIRTSLHYPES
FSHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLH
LKSQELHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQSSMPALIIINNM
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtgtacaatcagtgcaggagctcatcccggactccttcgtcccctgtgtc
gccgcgctgtgtagcgacgaagccgagcggctcactcgtctcaatcaccttagcttcgcg
gagttgcttaagcccttctctcgcctcacttctgaggttcatatgagagatcccaataat
cagcttcacataatcaaaaacttgaagatagcagtaagcaacattatcacccaaccacct
cagcctggagccattcggaagcttttgaatgatgttgtttctggcagtcagcctgcagaa
ggattagtagcaaatgtgattacggcaggagattacgacctcaacatcagtgctaccact
ccatggtttgagtcttacagagagacctttcttcagtcgatgccagcatcagatcatgaa
tttctgaaccactatttagcatgtatgttggtgacatcgtctagtgaagctgaacctatg
gaacagttttcaaagttgtcacaagaacagcatcgaattcagcacaacaatgattattcc
taccccaagtggtttataccaaatacacttaaatattatgtacttttacatgatgtaagt
gcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggttgctatttacttaaaattaattctcgaacacctaatcgagcgtcagatgaacag
ataccagatccttggagtcagtatctccagaaaaatagtattcaaaaccaggaatcatat
gaagatggcccttgtactataacttcaaataagaattctgatagtaacttgctttcattg
gatggattagataacgaagtcaaagtagatggcttaccaaacaactttagaactcacccg
cttcaattggacccatctggtgactcttctaacagcattgatggcccagatcatgtaaaa
tctgcttcatcattacatgaaacaaagaaagcaaatgctggaattattcatggtgcatgt
ttaacccttactgatcatgatagaattcgacagtttatacaagagttcacatttcggggc
ctcttgccacatatagagaaaacaattcggcaattaaatgatcagctaatatcaagaaaa
ggtttgagtcgatctttattttctgcaactaaaaaatggtttagtggcagtaaagttcca
gaaaagagcattaatgagctaaaaaatacatctggattgctgtatccgccagaagctcca
gagcttcaaatcaggaaaatggctgacttatgttttttggtgcagcattatgatttggct
tacagttgctatcatactgcaaagaaagattttcttaatgatcaagcaatgctttatgca
gctggtgccttggaaatggcagcagtgtcagcgttccttcagccaggagcacccaggcca
taccctgcacattatatggatacagcaatccagacatacagggatatctgcaagaatatg
gtattggctgaaagatgtgtattgcttagtgctgaaatcttaaaaagccaaagcaaatat
tcagaggctgcagctctcctaatacggttgaccagtgaggattctgatcttcgaagtgca
cttcttttggaacaggcggcacattgctttataaacatgaagagtcccatggttagaaaa
tacgcgtttcatatgatactggcaggtcaccggtttagtaaagcagggcagaagaaacat
gctttacgctgctattgtcaagccatgcaagtttacaaaggaaaaggctggtctcttgca
gaggatcacattaacttcaccattggacgtcagtcctatactcttaggcaactggacaat
gctgtgtctgcttttaggcatattttaatcaatgaaagtaaacaatctgctgctcaacaa
ggggccttcctcagagaatatctttatgtttacaagaatgtaagtcagctatcaccagat
ggtcctttaccgcagcttcctttaccatatattaacagttcagcaacacgggttttcttt
ggccacgacagacgaccagcagatggtgaaaagcaagcagctactcatgtaagtcttgat
caagaatatgactctgaatcctctcagcagtggcgagaacttgaggaacacgttgtggct
gtggtcaacagaggagtacttccatccaacttccaccccacagagtactgtttgaactgt
tactcagataactcaagatttccgctcacagttgtagaagagccaataacagtggaagtg
gcttttagaaaccctttgaaagttccacttttgttgactgatttgtcattgctctggaag
tttcaacctaaagatgtcagtggaaaggaaaatgaagaagttaaagaactagtaaaaggt
gaacctgaaatgattggaactgaagttgtttcagaattcttaattaatagcgaagaatct
aaagtggcaaggctgaagctctttccccatcacataggggagctgcatattctgggagtt
gtttataatcttggcactattcacagctccatgacagtagatggcattggtgctcttcct
ggatgtcacacaggaaagcattccttgagtatgtcagtccgagggagacaggatttagaa
attcaaggtcctcgacttaacaacacaaaagaagagaaaacatctattaaatatggtcct
gatcgacgtttagatcccataatcactgaggaaatgccactgttggaggtgttctttata
cattttcctacagggcttctctgtggagaaatccgaaaagcatatgtagaatttgtcaat
gtcagcaaatgtcctcttactggattgaaggttgtttctaaacgtccagagttctttact
tttggtggtaacacagctgttctaacaccactaagtccctcagcttctgagaactgtagt
gcttacaagactgttgtgacagattctacctctgtgtgtacagcactcatatcatcagct
tcttctgtagactttggcattggcataggaagtcagccagaggtgattcctgttcccctt
cctgacactgttcttctacctggagcttcagttcagctaccaatgtggttacgtgggcca
gatgaagaaggtgtccatgaaattaactttttgttttactatgaaagtgttaaaaagcag
cctaaaatacgtcacagaatattaagacacacggcagtcatttgtaccagtcgatctttg
aatgtgcgagccactgtctgcagaagtaattctcttgaagatgaggagggcagaggaggc
aatatgctagtctttgtggatgtggaaaataccaataccagtgaagcaggtgttaaggaa
ttccatatagtacaagtatcaagtagtagcaaacactggaagttacagaaatctgtaaat
ctctctgaaaacaaagatgccaaacttgcgaatagggagaagggaaagttttgcttcaag
gcaatacgatgtaaggaggaagaagttgctacacagtcctcagaaaaatatacctttgca
gatatcatctttggaaatgaacagatagtaagttcagcaagcccatgtgcagacttcttt
tatcgaagtttatcctctgaattgaagaaaccacaagcccagtcttctctgcatacagaa
aaacagtcaatagaggacactatgagattaattcagaagtgcaatgaggtggatttgaat
attgttgtattgtggaaggcatacgtagtggaagacagtaagcagcttattttggaaggt
cagcaccatgttgttcttcgcactataggaaaagaagctttttcatatcctcagaaacag
gagccaccagaaatggaactattaaaatttttcagaccagaaaacactatagtttcctca
agaccatcagtagagcagctttctaatctcattagaacgagtcttcactatccagaatca
tttagtcatccttttcatcaaaaaagcctttgtttagtaccagtgactcttttactttcc
aattgttcaaaggccgacgtcgatgtaatagttgatcttaggcataaaacaacaagccca
gaagcattggaaatccatggatcatttacatggcttggacaaacacaatataaacttcat
cttaaaagccaggagcttcacagtttgcagctgaaagcatgctttgtccatacaggtgtt
tataaccttggaactcctagggtatttgccaagttatcggaccaagttacagtgtttgaa
acaagtcagcagagctccatgcctgccctgatcatcatcaataacatgtga
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