Phocoena sinus (vaquita): 116739527
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Entry
116739527 CDS
T07759
Name
(RefSeq) RNA-binding protein 12 isoform X1
KO
K24526
RNA-binding protein 12
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116739527
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116739527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116739527
NCBI-ProteinID:
XP_032459760
Ensembl:
ENSPSNG00000009396
LinkDB
All DBs
Position
15:23670046..23708608
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AA seq
928 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSGRVNLP
TTVPNFNNPSPSVVTAATSVHESNKNVQTFSTASIGTAPPSMGASFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPVFLGPLNPVNPIQMNSQSSVKPLPIN
PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSIGPSGQTHPPPQALPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVT
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGIPSVGMPSA
GMPNAGMPNTGMPAAGMPGAGMPGVGIPSAGMPSAGMPSAGGEEHAFLTVGSKEANNGPP
FNFPGNFGGSNAFGPPLPPPGLGGAFGDARPGMPSVGNSGLPGLGLDVPGFGGGPNNLSG
PGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGSAPGHLSGPPAFGPGPGPGPGPVHVGGPP
GFGSSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAF
ESRDEATAAVIDLNDRPIGSRKVKLVLG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactattgttgagtagtaaaacggaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatataccaccagca
aatgctagtagatcaggacctccacctagttcaggaatgagtggcagggtaaacttgcct
acgacagtacccaactttaataatccctcacccagtgtagttactgccgccacttctgtt
catgaaagcaacaaaaacgtacagacattttccacagccagcataggaacggctcctcca
agtatgggggcctcctttgggagcccaacgtttagctcaaccattccgagcacagcctct
ccaatgaacacagtcccacctccaccaattcctccaatcccagcgatgccatctttgccg
ccaatgccgtccattcctccaataccagttcctcccccggtacctacattgcctcctgtg
cctcctgtgcccccaatacccccagtcccttctgtgccacccatgaccccactgccaccc
atgtcaggcatgccacccttgaacccgccacctgtggcacctctacctgctggaatgaat
ggctctggagcacctatgaatctgaacaataacctgaaccctgtgttcctgggtccattg
aatcctgttaaccctatccagatgaactctcaaagcagtgtgaaaccacttcccatcaac
cctgatgatctgtatgtcagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc
agagattttttccatgggctccgtgttgatgccgtgcatttgttgaaagatcatgtaggt
cgaaataatgggaatggattggttaagtttctctcccctcaagatacatttgaagctttg
aagcgaaacagaatgctgatgattcaacgctatgtggaagttagtcctgccacagagaga
cagtgggtagctgctggaggccatatcacttttaagcaaagtataggaccttctggacaa
acccatccccctcctcaggcacttcccaggtcaaaatcgcccagtgggcagaaaaggtca
aggtcaagatcaccacacgaggctggtttttgtgtttacttgaaagggctaccctttgaa
gcagaaaacaaacatgtcattgatttttttaaaaagttggatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaacgggtgaaggcttcgtagagttcaggaat
gaggctgactataaggctgctctgtgtcgtcataaacagtacatgggcaatcgctttatt
caagttcatccaattaccaagaaaggtatgctagaaaagatagatatgattcgaaaaaga
ttgcagaacttcagctatgaccagagggaaatgatgttaaatccggagggggatgtcacc
tctgccaaagtctgtgcgcatataacaaatattcccttcagcattaccaagatggatgtt
ctccaattcctagaaggaatcccagtggatgaaaatgctgtacatgttcttgttgataac
aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag
tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact
ctagaagatatgagagagattgagaaaaatcctcctgcccaaggaaaaaaggggttaaag
atgcctgtgccaggtaatcccgcagttccaggaattcccagtgtgggaatgcccagtgcg
ggaatgcccaatgcaggaatgcccaatacaggaatgcctgctgcaggaatgcccggtgct
ggaatgcccggtgtgggaatacccagtgcgggaatgcctagtgcgggaatgcctagtgca
ggaggtgaagagcatgccttcttgactgtaggatctaaggaggccaacaatgggcctcca
tttaactttcctggtaattttggtgggtcaaatgcctttggaccaccactccctcctcca
ggattaggaggggcctttggtgatgctaggcctggaatgccttcagttggaaatagtggt
ttgcctggtctaggactggatgttccaggttttggaggtggaccaaataatttaagtgga
ccaggatttggagggggccctcagaattttggaaatggccctggtagcttaggtggcccc
cctggctttggaagcggccctcctggccttggaagtgcccctgggcatttgagtgggcct
ccagcctttggccctggccctggcccaggcccaggcccagtccatgttggtggtcctcct
ggctttggatctagttctggaaaaccaggaccaacagtaatcaaagtacagaacatgccc
ttcactgtgtctattgatgagattttagatttcttttatggctatcaagtgatcccaggc
tcagtgtgtttaaaatacaatgaaaaaggtatgcccacaggtgaagctatggtggctttc
gaatctcgggatgaagccacagctgctgtcattgacttaaatgacagacctattggctct
aggaaagtaaaactcgtattagggtag
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