Phocoena sinus (vaquita): 116740605
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Entry
116740605 CDS
T07759
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116740605 (RBFOX1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116740605 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116740605
NCBI-ProteinID:
XP_032462244
Ensembl:
ENSPSNG00000009035
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All DBs
Position
15:53980034..56214308
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AA seq
553 aa
AA seq
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MASPSGSPEDTGKLRGRDGRQRREEEDAPPEEKRLRLGLEGGSVAKEEGEGAPRLGREET
GIQTGVEDRGDLLSLPYSLVEGEDYTSENSALLSSAKSSPQDSVSASLAASKAEETAQRT
HASGTYSFLDQTQHSDIKVDCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQP
YASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPAAQSHSEQSAADTSAHT
VSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKIL
DVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNP
YTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAA
AAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPA
TAAAYSDSYGRVYATDPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQA
SIYRGGYNRFAPY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccttccggcagccccgaggacacgggcaagctcagaggcagggatggccgg
cagaggcgggaggaggaggatgcccctccggaggagaagaggttgaggctggggctggaa
ggaggaagcgtagcgaaggaggaaggagaaggcgcgccacgactgggcagggaagagacc
ggcatccagacaggtgttgaagacagaggtgacctactgtccctgccatacagcctggtc
gagggtgaggactacacatctgaaaattcagccctcctctccagtgccaagagcagtcca
caagactcagtttcggcaagcctggctgccagcaaagctgaggaaactgctcaaagaact
catgcaagtggaacttacagcttccttgatcagactcaacattcagatatcaaagtagac
tgcaatacctgtgtggaaatagaggacagaaaggtttcaagacaacagatgaattgtgaa
agagagcagctaaggggtaatcaggaagcagcagctgcccctgacacaatggctcagcct
tacgcttcggcccagtttgccccccctcagaacggcatccccgcggaatacacggcccct
catccccaccccgcgccagagtacacgggccagaccaccgttcccgagcacacgttaaac
ctgtaccctgccgcgcagtcgcactcggagcagagcgcagcggacacgagcgcgcacacc
gtctcgggcaccgccacacagacagatgatgcggcgcccacagatggtcagccccagaca
caaccttccgaaaatacggaaaacaagtcccagcccaagaggctgcacgtctccaacatc
cccttcaggttccgggatcccgacctccgacaaatgtttggccaatttggtaaaatctta
gatgttgaaattatttttaatgagcgaggctcaaagggatttggtttcgtaactttcgaa
aatagtgccgatgcggacagggcgagggagaaattacacggcaccgtggtagagggccgt
aaaatcgaggtaaataatgccacagcacgtgtaatgacaaataaaaagactgtcaaccct
tatacaaatggctggaaattgaatccagttgtgggtgcagtgtacagtcccgaattctat
gcaggcaccgtgctgttgtgccaggcaaaccaggagggatcttccatgtacagtgccccc
agttcacttgtatatacctccgcaatgcccggcttcccgtatccagccgccaccgccgcg
gccgcctaccgaggggcgcacctgcgaggccgcggccgcaccgtgtacaacaccttccgg
gccgcggcgcccccgcccccgatcccggcctacggcggtgttgtttaccaggatggattt
tatggtgcagacatttatggtggttacgctgcatatcgctacgcccagcccacccctgcc
actgctgctgcctacagtgacagttacggacgagtttatgctaccgacccctaccaccac
acacttgctccagcccccacctacggcgttggtgccatgaatgcttttgcacccttgact
gatgccaagactaggagccatgctgatgatgtgggtctcgttctttcttcattgcaggct
agtatataccgagggggatacaaccgttttgctccatactaa
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