Phocoena sinus (vaquita): 116740690
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Entry
116740690 CDS
T07759
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116740690
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116740690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116740690
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116740690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
116740690
NCBI-ProteinID:
XP_032462418
Ensembl:
ENSPSNG00000004930
LinkDB
All DBs
Position
15:complement(79202152..79250588)
Genome browser
AA seq
1217 aa
AA seq
DB search
MSPAASAAGGGDRRRPLASVRDGRGRGWGCGGPFGAALLVLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRGSRAFSLVRNARRQRTLLASPPAKSAVNGNLLEPRSLLEGPDPA
ELLLLGSYLGKPGPPQPAPAPESRDLRERPGRRPPARTAPPAQSAHPRGVQVHPFLPTPL
LRSSRRPSHRDCGTLSHRFVITPRRRYPIQQTQYSLLGVLPTVCWNGYHKKTVLSARNSK
MVCSPVTVRIAPPDSKLTRSPIREQIINSTLSSPSTSAPDPCAKETVLNALKERKKRTVE
EEDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHSN
KRSRTSSMSSLTSTYTGGIPSSSRNAIASSYSSTRGLSQLWKRSGPGSSPFSSPASSRSQ
TPERPAKKIREEELSHHSSSSTPLVTDKESQGEKVADKTTCKKQNPWKSPSTPGSSGRRK
RKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKVLEDKTDAASNSVTEN
PPTSQSSFTFTLPAAGTASSPSSLPAPSTNPLLESLKKMQNSPGLPSLPESAGVATTVAH
SPPKTPSPLAPLGSSESAPLPGTSEDSKSTTTFLGLTPASSPGPVTDAKSPPDPQAETSA
KSQAPSAPSPSPKQSILFGMLSTPPVNPPASAAPAVSSASPMFKPIFVVPPKSENEGPLP
SSPSKVTATASSSLAVPMTTSSPPLTFKPIFSNMGPPASVPMLTPFSLKQTATPATTTSA
PLFSGQAGATSAVVSMTTASASADSAPKPAFSFGVRTAASTPSSVTSTTASASQPFLFGT
PPASGASFTPAVGPIFQFGKPPAMPASTAVATFGQSLPSAAHTAPSSSSSSSTASFSGFG
STLTASAPVSSSQPTLTFSSATAPAFNIPFGSSAKPPPSSYPGANPQPAFGAADGQQQGA
AKSALVPSFGSSFTFGNSAAPAPTAAPAPAPAQPAFGGTAQSAFSGLKATASAFGTPVST
QPAFGGTTAAFSFGAATTSGFGATTQTASSGTSSSVFGSTTPSPFTFGGPAAPAGGGGFG
ISAATPGSSSASGAFGFGAGQSGTTGSTTPFGGGLSQNSLGAPSQSTPFAFNVASTPDSK
PVFGGTSTPAFGQNTPAPGVGASGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKT
PGARQRLQARRQHTRKK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggcttcggcggctggaggaggcgaccgacggcggccgttagcgagtgtc
agggacggccggggccggggctggggctgcggcgggccgttcggggcggcgcttctcgtc
ctgtcgctgctcggcctcgtgctgtacctggtgccggcggcggctgcgctggcctggctg
gctgtgggggctaccgcggcctggtggggactgagccgcgagccccggggttcgcgcgcc
ttctcgctggttcggaacgccaggcgtcagcgaacactgctcgcctcgcctccggccaag
tcggcagtaaacggaaatcttctagagccgcggagcctgctggaaggacccgaccccgct
gaactgctcctcttgggcagttacctgggcaaaccaggccccccgcagcctgcccccgcc
ccggagagcagggacctgcgggagaggccgggccgacgcccacccgcccgcaccgcgccg
cccgctcagtcggcgcatccccgtggcgttcaagttcaccccttcctccccactcctctc
ctccgatcctctaggaggccttcccaccgggattgtgggactttatcacatcggtttgta
ataacacctcgaagaagatatccaattcaacagacccaatattccttgctgggggtgctt
cccacagtatgctggaatggttatcacaagaagactgtgctatctgctcgtaattccaaa
atggtgtgcagcccagtgacggtgaggattgctcctccagatagcaaattgactcgttct
ccgatacgagagcaaattatcaactcaacactgtcctcaccatcaactagtgccccagac
ccatgtgcaaaggagacagtactgaatgccctcaaagagaggaagaaaaggacagtggag
gaggaggaccaaatatttgctgatggccaggaaaataagagaaggcgccatgatagcagt
gggagcggacattcagcatttgagcccctggtggccaacggagtccctgcttcttttgtg
cctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgatcactcgaat
aagagatcgcgcacctcttctatgagctccttgacaagcacatacacaggtggcatccct
agctccagccgcaatgccattgccagttcttacagttctactcgaggtctctctcagctg
tggaagaggagtggacccggttcatctcccttctctagcccagcctcatcccgctcccag
acaccagagcggccagcgaagaaaataagagaagaggagctttctcatcattctagttct
tcaactccattggtaacagacaaggagtcccagggagaaaaggttgcagataaaaccaca
tgtaagaaacagaacccgtggaaatccccatcaacacctggcagctctgggcggcgtaaa
cggaaggttcagttgctgccctccaggcgaggggaccagctgaccttgcctccacctccc
cagcttggttattcaatcactgctgaagacttagacttggaaaagaaagcttctttacag
tggtttaacaaggtcttggaggataagactgatgctgcctcaaactctgtcactgagaac
ccacctaccagtcagtcttctttcacttttaccctgcctgctgctgggactgcttcatcc
ccatcctccctcccagccccaagcactaacccactgttggagagcttgaagaagatgcag
aattccccaggcctaccatccctccctgaatctgctggcgtggcaaccactgtggcccat
tcgcctccaaagacacccagccctctggcccctctgggctcttcagagtcagcacccctt
ccaggcacctccgaagactccaaatctaccaccactttcttgggactgacccctgcttct
tccccaggaccagtcactgacgccaagtcacctccggaccctcaggctgagacatctgcc
aaatcccaagccccatccgccccatctcccagccccaagcagagtattctgtttggaatg
ctgagcaccccacctgttaaccctcctgcctctgcggcccctgctgtgtcttcagcatct
cccatgttcaagcccatttttgtggtcccacctaaaagcgagaatgagggccccttgccc
tctagcccttccaaggtcacagccacggcatcttccagcttagccgtccccatgacgact
agcagcccacccctcactttcaagcctatctttagcaacatggggccacctgcatctgtg
cccatgttaactcccttctccctcaagcaaacggctactccagccactaccacgagcgcc
cctctcttcagcggccaggctggcgccacctctgcagtggtgtccatgaccacagccagc
gcctccgcagactctgctccgaagcccgcgttcagcttcggtgtgcgcaccgcagccagc
accccgagcagcgtgactagcaccaccgcttccgcctcccagcccttcctctttgggact
ccccctgcttctggtgccagcttcaccccagccgtgggccccatattccaatttggcaag
cctcccgccatgcccgcttcaacagcagtcgccacctttggccaatcccttcccagtgcc
gcccacaccgcccccagcagcagcagcagcagcagcacagccagctttagtggctttggc
agcaccctcaccgcctcagccccagtcagcagcagccagcccacgctgacgttcagtagc
gccaccgccccagcgttcaacattcccttcggctcgagcgccaagccacctccctcgtcc
tacccaggagccaacccccagcccgccttcggggctgcggatgggcagcagcagggggct
gccaagtcggcccttgtccccagcttcggcagctctttcacttttggaaactctgcagcc
ccggccccgactgcggctccagcgccagccccggcccagccagcctttggtggcaccgcg
cagtcggccttcagtggtctgaaggccacggcctctgcctttggcacccctgtcagcacc
cagccagcctttggtggcaccacagctgccttctccttcggtgcagccaccacctctggc
tttggagctacaacccagaccgccagcagtgggaccagtagctcggtgttcggcagcacg
acaccatcgcccttcacatttgggggaccggcagccccagccggcggtgggggctttggg
atcagtgcggccaccccaggctccagctctgcctctggagcgttcggctttggagcagga
caaagtgggaccactggcagcacgacccctttcgggggaggcttgagtcagaacagcttg
ggcgcgcccagccagagcacaccctttgccttcaacgtggccagcacgccggacagcaaa
cctgtgtttggaggcacctccacacccgcctttggtcagaacacccctgctcctggggtg
ggcgcatcaggcagcagcctctcctttggggcatcctcaacacccgcccaaggctttgtc
ggagttggacctttcggatcggcggccccctccttttccattggtgcgggatccaagacc
ccaggggctcgacagcgactgcaggcccgaaggcagcacacccgcaagaaatag
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integrated database retrieval system
