Phocoena sinus (vaquita): 116744926
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Entry
116744926 CDS
T07759
Symbol
WDR78
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 78
KO
K24723
dynein axonemal intermediate chain 4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116744926 (WDR78)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116744926 (WDR78)
04812 Cytoskeleton proteins [BR:
psiu04812
]
116744926 (WDR78)
Cilium and associated proteins [BR:
psiu03037
]
Motile cilia and associated proteins
Dynein arm
116744926 (WDR78)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116744926 (WDR78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
116744926
NCBI-ProteinID:
XP_032470874
Ensembl:
ENSPSNG00000003982
LinkDB
All DBs
Position
1:complement(58018439..58147531)
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AA seq
854 aa
AA seq
DB search
MTPGKHSRALAGAADAGGWXYRGSRSSQGRGWSTTPHPVATMPISPVNSRKQPNVGVNTG
TQSKRSISFTGPAKGAQMKGGYISANQSKMAGSKTMVILPDPKTVEKMNISSTKTATRVT
DIHGVDVTPRPLYHPDPYTGTAKPNKLLTSQEGSRTSDFIASYSLYQNTINPSTLGQFTR
SILGSSTVSKSSTSTTESMVEDLEEPSFKRERLASFTDLQVIRATPGKIVTKEDLEKTIE
IILTETETMNFFNLPTVMVSVGSEEAEKVSRRNKNYETLCRNRLGNDLYVERMMQTINGA
PKNKHVQCDKIMKEDKGIMSTAWDLYDSYNAMELSSLPVKRSTVDSSSKACVPSKDWDQR
MPGSNLEKISEGSSLMDIENVILAKVHDEEEDNSEAVLKSDKFQQDLFFMERVIMENIFQ
PKLAAYRQLPVLKEPEPEDFLVGEKLEEVEEEVKKEEEEEIEIGSEQSTIPANLERLWSF
SCDLTKGLNVSSLAWNKKNPDLLAVGYGHFGFKEQKRGLACCWSIKNPMWPERTYQSPYG
VTAVDFSIGAPNLLAVGYHNGTIAIYNVQSNSNIPVLDSSESPQKHLGPVWQLQWIEQDR
GTAGDDKREILVSISADGRISKWVMRKGLDCHDLMRLRRTTASSSKKGGKKEKKGEALLS
RQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKIAWNPFCHD
VFLSCSADWGIIIWQHENLKPFLSFYPTTYVVYDVAWSPKSSYIFAAANESRVEIWDLHF
STLDPLIVNVANPGIKFTTVLFTKQTDCLLVGDSDGQVAVYELRNMPPALDSNRGDIINT
LLGPKSNQSIIHHQ
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccggcaaacattcccgtgccttagccggagccgctgacgccgggggttggngg
tacaggggctccagaagcagccagggaagggggtggtcgaccactccccacccagtcgcc
accatgcccatctctccggtaaacagccgcaagcagccgaacgtcggggtaaacactggc
acacagtcgaagaggtctattagctttactggcccagcaaaaggagcgcaaatgaaagga
ggatatattagtgcaaaccaaagcaaaatggctgggtcaaaaaccatggtgattctacct
gaccccaaaacagtagaaaaaatgaatatttcctccacaaagacagccacgcgggtgact
gatatacatggagttgatgttactcccagacctctttaccatccagatccatatactggt
acagcaaagccaaataaactattgacatcacaagaaggatcacgtacatcagactttata
gcttcctatagcctttatcagaatacaataaatcctagtacgttagggcagtttacaagg
tcaattttaggaagcagtacagtttctaagtcaagtacatccactactgaatcaatggta
gaagacctagaagaaccatcctttaaacgggaaaggttggctagttttacagatttacaa
gttattagggcaacacctggaaaaattgtaacaaaagaagacctggagaagactatagag
ataatactcacagagacagaaacgatgaacttttttaacctaccaacagtcatggtttct
gtaggatctgaagaagctgagaaagtaagccggagaaacaagaactatgagactctttgt
cgaaatagattaggtaatgacttatatgtagaaaggatgatgcagactattaatggagca
ccaaagaataaacacgttcaatgtgacaaaatcatgaaggaagacaaaggcataatgtcc
actgcttgggatttgtacgattcttataatgctatggagctttcatctttaccagtaaaa
agatctacagttgattcaagtagtaaagcatgcgtaccttctaaagactgggaccaaaga
atgccagggagtaatttagaaaaaattagtgaaggtagttctctaatggatattgaaaat
gtaattctggctaaagtccatgatgaagaagaagacaactcagaggcagtattgaaatct
gataagttccaacaggacttattttttatggaacgagttataatggaaaatatatttcag
ccaaaacttgcagcttatcgtcagcttcctgttttaaaagaaccagaacctgaagacttt
ttagtaggtgaaaaacttgaagaggtagaagaagaggttaagaaggaagaggaagaagaa
atagaaataggttcagaacaatcaacaataccagccaatttggaacgactttggtccttt
tcctgcgacttaaccaaaggccttaatgtgagcagccttgcctggaataaaaaaaatcca
gaccttttggctgttggctatgggcactttggatttaaggagcaaaaaagaggattggct
tgctgctggtcaataaagaatcccatgtggccagaacgtacttatcagagtccatatggc
gttactgctgtggatttttcaattggagcacctaaccttttagcagttggctatcacaat
ggcactattgcgatttataatgtacagagcaacagtaacattccagttctggatagtagc
gaatcacctcaaaaacatttgggacctgtatggcaactacagtggatagaacaagatcga
gggacagcaggtgatgacaaaagagaaatactagtttctatatcagcagatggaaggatc
tccaaatgggttatgcggaaaggactggactgtcatgatttgatgcgtttgaggagaact
actgctagcagcagcaaaaaaggaggaaaaaaagaaaagaaaggtgaagctttgttatct
cgacaggctcctggaatgtgttttgcttttcaccccaaggacacaaatatctatttggct
ggcactgaagaaggtcatattcacaaatgttcttgttcatataatgagcaatatctagat
acctacagaggacacaagggtccagtgtataaaatagcatggaatccattttgtcatgat
gtattcttaagctgttctgcagattggggcattattatatggcaacatgagaatcttaag
ccatttttgagtttttatccaactacttatgttgtttatgatgttgcctggtctccaaaa
tcatcctatatatttgcagctgcaaacgagagcagagtggagatttgggaccttcacttc
agcactttggaccctctgattgtgaatgttgctaaccctggaatcaagttcacaactgtt
ctcttcactaagcaaacagattgccttctggtgggagacagtgatggacaagttgctgtg
tatgaattaagaaatatgccccctgctttggactctaaccggggagatataataaatact
ttgcttggacccaagtcaaatcaaagcataattcatcatcagtag
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