Phocoena sinus (vaquita): 116746347
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Entry
116746347 CDS
T07759
Symbol
CTC1
Name
(RefSeq) CST complex subunit CTC1 isoform X1
KO
K23311
CST complex subunit CTC1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiu03032
]
116746347 (CTC1)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomere proteins
CST complex (animals)
116746347 (CTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTC1
CTC1_2
CDC24_OB3
zf-4CXXC_R1
Motif
Other DBs
NCBI-GeneID:
116746347
NCBI-ProteinID:
XP_032473664
Ensembl:
ENSPSNG00000022102
LinkDB
All DBs
Position
20:8320363..8339065
Genome browser
AA seq
1226 aa
AA seq
DB search
MAACRAEAPGSFPWWARWSGRCLNSLHFPQEQAWLEAAQAFIEETLCPPGKEPDVQLTQL
VIDCVKTVWLPQGRNQGLTLPLSYSFVSVKDLRTHQRLPCCSHLSWSSTAYQAWAKEAGP
RGVPLPRERLLLLGTLTDLSGDLEQECRNGSLYIRDNTGTLGCELIDLDLSWLGHLFLFP
SWSYLPPAMKSSGEGHLELWGAPVPVFPLTISPGPLTPIPVLYPEMASHLLRHSKHRNVQ
PNLAGELVRLSALVKSRKKAYFILSLGGSSSVGSHVSVIVQIPAQLVWHRALWPHKAYVL
TELRASKLPGHRYRIWMTSPSSRLLPLKPECVRELELELEGAPLETNPQPLPILSNPQDN
KGPDGLVRDSRLLSYTGTVTGTLNQPAGLYELDGQLGLCLAYQQFHGLRRVVRPGVRLEL
QDVHLLQSMGGGTRRPMLAPCLRGAVLLQGFSRLMPETQSSHRAPGASLYEQLVWEHQLG
LPLYLWASKALEELACKLCPHVLRHHQFLQHSSPGNPSLGLQILAPTLEVLVPPGCPGRN
THSEILEEPHHCPLQKYARLQTPCSFPTLAALKEEGKCRAWASFDPKTLLPLPEASHLPS
CQLNQRLAWSWLCLLPSAFHPAPVLLGILVASSRKGCLRLQDQSGSLPCLLLAKPSQPLT
DPGLIGCLVRAERFQLIVERNVRSSFPSWKELSMTGFMQKKQARVYVQIFLADALILSVP
RPVLHSATSSSPPQTEPSLPEGPHIGQSRLFLLSHKEALMKRNFCVPPGASSEVPKPTLS
FLVLGSWLGGTQRKEGTGWGPPEPREGENSDQKVLLIFLSSSVRWFELLHPGQVYRLVVP
GPPTPTLFKEGGSSCVSLRPPELAGCASCLTVQDEWTLELASSQDIPEVLGISRALPESS
LTDLLSGNFTDSLVSFSAEILSHLWIKPGSSGATRRCVKLTVALETADCEFPPHLDIYIE
DPHLPPPRGLLPGARVYFNQLEKKVSRSHNVYCCFRSSTCVQVLSFPPDTTISAPLPHIY
LAELLQGEKAPFRATASCHVVSVFSLQLLWVCAHCTSICPQGRCTRQSPACPTQTSISQA
SIRLLVEDGTAEAVVTCRNHQVAAALGLCPSEWTSLLELVRGPGTVALQFTGPGAQPESS
AKTDEPLTLFLWTLCTSFSVLRPIVLSFELEKKPSKIIPLEPPRLQRFQCGEFPFLTRVN
PRIRLSCLSIQEPEHPSALGALVSSY
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctgccgggctgaggctcctggctcctttccttggtgggcaagatggtcagga
aggtgtttgaactcgcttcactttcctcaggagcaagcctggcttgaggctgcccaggcc
ttcatcgaagagaccctgtgtccacctggcaaggagcctgatgtccagttgactcagttg
gtaattgactgtgtgaagactgtctggttgccccagggaaggaaccagggtttaacactg
cccctcagctacagctttgtctcagtaaaggacctcaggacccaccaacgtctcccatgc
tgcagccacttgtcctggagcagtactgcgtaccaggcttgggccaaagaggccggacca
cgtggcgtccccctgccccgggaacggctgttacttttagggacactaacagacctatca
ggggacttggaacaagagtgcaggaatggaagcctctatataagagataacactggtacc
ctgggctgtgagctcatagatctggacctttcttggttgggccatctctttctgtttccc
agctggagttacctccctcctgcaatgaagtcctcaggagaagggcacttggagctctgg
ggtgcccctgtgccagtgtttcccttgaccatcagtcctggccccctcacccccatccct
gttctctacccagagatggcttcccacctgctcaggcacagcaagcacagaaatgtgcag
ccaaaccttgctggggagctggttcgattgagcgctctggtgaaaagtcgaaagaaagcc
tacttcatcctgtctcttggtgggtcatcctcagttggcagccatgtgtctgtcatcgtg
cagatccctgcccagctggtgtggcaccgagccctttggcctcataaggcctatgtgctg
acggagctgcgagcgtccaagctccctggtcaccgttaccggatttggatgaccagtccc
tcctcccggcttttgccactgaaaccagaatgtgtgcgagagctggaactggagctggaa
ggagcccccttggagaccaacccccagccactccccatactcagcaatcctcaagacaac
aagggtccagacggtctcgtccgggactccaggctcttatcatacacgggaacggtcact
ggcacgctgaatcagcctgcgggcctctacgagctggacgggcagctggggctctgcctc
gcctaccagcagttccatggtctcaggcgggtagtgcgaccaggagtccgtctggagctc
caggatgttcatctcctgcagtcaatgggtggggggacaagaaggcccatgttagccccc
tgcctccgtggcgccgttctacttcagggcttctctcgtctgatgcctgagactcagtct
tcccaccgagcccccggggcctccctgtatgagcagctggtgtgggaacatcagttagga
cttcccctctacctgtgggcctccaaggccctggaggagctggcctgcaagctgtgtccc
catgtgctgagacaccaccagttcctgcagcattcctcgcctgggaaccccagcctggga
ctacaaatcctggcccctaccttagaggttctcgttccacctggctgccccggtcggaat
acacacagcgagatccttgaagagccacatcactgtccgctgcagaagtacgctcgactg
cagaccccctgctctttccctacactggccgccctgaaagaggaagggaagtgcagggcc
tgggcctcctttgaccctaagacccttctgccactcccagaggcttctcacctgcccagt
tgccaactcaatcagcgcctggcctggtcctggctctgtctgctgccctctgccttccac
ccggccccggttctgcttgggattctggtggcttcatctcgtaaaggttgtctgcgactt
caggaccaaagcggttccctcccctgcctactcctggccaagccctcgcagcccctcact
gaccccgggctcataggctgcctggtgcgggcggagaggttccagttgatcgtagaaagg
aatgtcagaagcagcttcccttcctggaaggagctgagcatgacaggcttcatgcagaag
aagcaggccagagtctatgtccagatttttctggctgatgccctgatcctgtctgtgccc
agacccgtccttcactcggccacctcctcaagccctcctcagacagagccctccctgcca
gagggtccccacataggacagagccggctgttcttgctgtcccacaaggaggcactgatg
aagaggaacttctgtgtccccccaggagccagttcggaggtgcccaagcccaccctcagc
ttcctcgtgttagggagctggcttgggggcacccagaggaaggagggaactggatggggc
ccacccgagcccagggaaggtgaaaactcggatcagaaggttctcctcatcttcctcagc
tcctcagtccgctggtttgagttgttgcacccagggcaagtgtaccgactcgtggtccct
ggccctcccacaccaacgttgttcaaggagggtggttcatcctgcgtatcactgcgtcct
ccagagctggctggctgtgcgtcctgcctcactgtccaggatgagtggaccctggaactt
gcgagctcccaggacatcccagaggtgctgggtatcagcagggcactgcctgaatcctcg
ctgactgacctgctcagtggcaatttcacagattccttggtgtctttctcagctgagatt
ttgtcacatctctggataaagcctgggagctctggggccacgagacggtgtgtgaagctc
accgtagccctggagacggccgactgcgaattcccccctcacttggacatatatattgaa
gacccacacttgcctcccccacggggacttcttccaggagcccgagtctactttaaccag
ctagagaaaaaggtttccagatcccacaatgtttactgttgtttccggtcgtctacctgt
gtgcaggtcctgagttttcccccagataccacaatcagtgcccccctaccccacatctac
ctagccgaacttctacaaggtgagaaggccccattccgggccactgcctcttgccacgtc
gtttcggtcttcagccttcagctcctctgggtgtgtgctcattgtaccagcatctgcccg
cagggaaggtgtactcgtcagagccctgcttgccccacgcagacatctataagccaggcc
agcatcaggctcctggtggaggatgggactgccgaggctgtggtgacctgtagaaatcat
caagtggcagcagcactaggactgtgtccgagtgagtggacctccctcctcgagctcgtt
cgagggccagggacagtggccttgcaattcacggggcctggagcccaacctgagtcctca
gccaagactgatgagcccttgaccctcttcctctggacactgtgtaccagtttctctgtc
ctccgccctattgtgctttcttttgagcttgagaagaaaccctccaagatcatcccgtta
gaacctcctcgactacagcgattccagtgtggggagttccctttcctgactcgtgtgaat
cccaggatccgactgtcatgcctctctatccaggagcctgagcaccccagtgccctgggg
gccttagtttcctcctactaa
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