Phocoena sinus (vaquita): 116751399
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Entry
116751399 CDS
T07759
Name
(RefSeq) putative F-box/LRR-repeat protein 21 isoform X1
KO
K10287
F-box and leucine-rich repeat protein 21
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
116751399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116751399
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
116751399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
116751399
NCBI-ProteinID:
XP_032483118
Ensembl:
ENSPSNG00000018891
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All DBs
Position
3:complement(58892503..58908789)
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AA seq
462 aa
AA seq
DB search
MDVGEHPIAAVTSFRLFRGDSNLEAFFRMKRNNLSVGNKVVQSSPAVKQPKLGFYSSLSQ
THTYTVLLDWGSLPHYVVLRIFQYLPLMDRAWASSVCRRWNEVFHIPDLWRKFEFELNKS
ATSNFNCTHPALIQQIIKKHAAHLQYVSFKVDSSTESAEAACDILSQLVNCSIQTLGLIS
TAKPSFMNVSKSHFVSALTVVFVNSKSLSSIKIEDTPVDDPSLKILVANNSDTLRCLKMS
SCPHVSSDGILCVADHCQGLRELALNYYMLSDELLLALSSETHVNLEHLRIDVVSENPGQ
IKFLSVKKQSWDVLIKHSPGVNVVMYFFLYEEELETFFKEETPVTHLYFGRSISKAVLGR
IGLNCPRLIELVVCANGLQALDNELICIAEHCKNLTALGLSECEVSCSAFIEFVRLCGRR
LTQLSIMEEVLIPDDDYSLDEIHAEVSKYLGRVWFPDVMPLW
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggtgagcaccccatagcagcagttacttcatttcgcttgttcagaggggac
tctaacttggaagccttctttagaatgaagaggaataatttatctgttgggaataaagtt
gtccagtcttcaccagcagtgaaacagcctaaacttgggttctactcttctctcagccag
actcatacatacactgtccttctagactgggggagtttgcctcactatgtagtgttacgc
atttttcagtatcttcctttaatggaccgggcctgggcatcttctgtatgtaggagatgg
aatgaagtttttcatattcctgacctttggagaaagtttgagtttgaactgaacaagtca
gctacttccaattttaactgcactcatcctgctctcattcagcagatcattaaaaagcat
gctgcccatctccagtatgtcagctttaaggttgatagtagtactgaatcagcagaagct
gcctgtgacatactttctcagctggtaaattgttctatacagactttgggcttgatttcg
acggccaagccaagttttatgaatgtgtcaaagtctcattttgtgtcagcacttacagtt
gtttttgtcaactcaaagtcattatcgtcaatcaaaattgaagacacaccagtggatgat
ccttctttgaagattcttgtggccaataatagtgatactctaagatgcctcaaaatgagt
agctgtcctcatgtttcatctgatggaatcctttgtgtagctgaccattgtcaaggtctt
agagaactggcattaaattattacatgctaagtgatgaacttctcctggcactttcaagt
gagacccatgttaaccttgagcatcttcgaatagatgttgtgagtgaaaatcctggacaa
atcaaatttctttctgttaaaaaacaaagttgggatgtactcattaaacactcccctgga
gttaatgttgttatgtacttctttttatatgaagaggaattggagacgttcttcaaagaa
gaaacccctgttactcacctttattttggtcgttccataagcaaagcagttctaggacgg
ataggtcttaactgtccacgactaatagagttagtagtatgtgctaatggtcttcaggct
cttgataatgaacttatttgtattgctgaacactgtaaaaacttaacagccttgggcctc
agtgaatgtgaagttagctgcagtgcattcattgagtttgtaagactatgtgggagaagg
ctaacccagctctctatcatggaggaagttttgatccctgatgacgattatagcctagat
gaaattcatgctgaagtctccaaatacctgggaagagtatggttccctgatgtcatgcct
ctctggtaa
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