Phocoena sinus (vaquita): 116751718
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Entry
116751718 CDS
T07759
Symbol
PITX1
Name
(RefSeq) pituitary homeobox 1
KO
K09356
paired-like homeodomain transcription factor 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751718 (PITX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116751718 (PITX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116751718
NCBI-ProteinID:
XP_032483863
Ensembl:
ENSPSNG00000019302
LinkDB
All DBs
Position
3:59729741..59735036
Genome browser
AA seq
314 aa
AA seq
DB search
MDAFKGGMSLERLPEGLRPPPPPPHDMGPAFHLARAADPREPLENSASESSDTELPEKER
SGEPKGPEDSSAGGAGCGGVEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMRE
EIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAGYS
YNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMTMPSSMGPGAVPGMPNS
GLNNINNLTGSSLNSAMSPGGCPYGTPASPYSVYRDTCNSSLASLRLKSKQHSSFGYGGL
QGPASGLNACQYNS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaaggggggcatgagcctggagcggctgccggaggggctccggccgccg
ccgccgccgccgcacgacatggggcccgccttccacctagcccgcgccgccgacccccgc
gagccgctcgagaactccgccagcgagtcgtccgacacggagctgccagagaaggagcgc
agcggggaacccaaggggcccgaggacagcagtgcgggcggcgcaggctgcggcggtgtg
gaggaccccgccaagaagaagaagcagcggcggcaacgcacgcacttcacaagccagcaa
ttgcaagagctggaggccacgttccagaggaaccgctacccggacatgagcatgcgggag
gagatcgccgtgtggaccaacctcaccgagccacgcgtgagggtctggttcaagaaccgg
cgagccaagtggcggaagcgcgagcgtaaccagcagctggacctgtgcaagggcggctac
gtgccgcagttcagcggcttggtgcagccctacgaggacgtgtacgccgctggctactcc
tacaacaactgggccgctaagagcctggcaccagcgccgctctccaccaagagcttcacc
ttcttcaactccatgagcccgctgtcgtcgcagtccatgttctcggcccccagctccatc
tcctccatgaccatgccgtcgagcatgggcccgggcgctgtgcccggcatgcccaactcg
ggcctcaacaacatcaacaacctcaccggctcctcgcttaactcggccatgtcaccgggc
ggctgcccgtacggcacacccgcctcgccctacagcgtctaccgggacacgtgcaactcg
agcctagccagcctgcggctcaagtccaagcagcactcgtcgttcggctatggcggcctg
cagggcccggcctcgggcctcaatgcgtgccagtacaacagctga
DBGET
integrated database retrieval system
