Phocoena sinus (vaquita): 116753217
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Entry
116753217 CDS
T07759
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116753217 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116753217 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116753217 (USP16)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116753217 (USP16)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116753217 (USP16)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116753217 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
116753217
NCBI-ProteinID:
XP_032486654
Ensembl:
ENSPSNG00000015752
LinkDB
All DBs
Position
4:130107567..130137838
Genome browser
AA seq
826 aa
AA seq
DB search
MGKKRTKGKTVPIDDSSESLEPMCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDK
SEEETEENPSVWLCLKCGHQGCGRNSQEQHALKHYMTPRSEPHCLVLSLDNWSVWCYLCD
DEVQYCNSNRLGQVVDYVRKQAGITAPKSAAKDSGNIELENKKLEKESKNEQEREKKENM
AKENPSMNSTSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPD
LALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGIVTPRELFSQVCKKAVRFKGYQQQDS
QELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSVPSFVDRVFG
GELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSINDKNLKKTMDDEDKESEEEKD
NDSYIKERNDILSGTSKHLQKKAKKQAKKQAKNQRRQQKIQGKVLHLNDIYAIDHPEGNE
CEVEMSLQREVDIKSNHISQEEVIHKEYCVNQKDLNGHEKMIESITDNQKSTEEVDMKNV
NMDNDLKVLASPAECTRNLNGAYMKEGSSGEVDISSGFKNLNLNAALQPDEINLEILNDD
HTPGMKVYEVVNEDPETAFCTLANREAFSTDECSIQHCLYQFTRNEKLRDANKLLCEVCT
RRQYSGPKANIKGEKKHVYTNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNRHIKFPE
ILDLAPFCTLKCKNVAEENTRVLYSLYGVVEHSGTMRSGHYTAYAKARSANSHLSNLVLH
GDILQDFEMESTKGQWFHISDTHVQAVPTTKVLNSQAYLLFYERIL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacggacaaagggaaaaactgttccaattgatgattcttctgaatcttta
gaacctatgtgcagacacattagaaaaggattggaacaaggtaatttgaaaaaggcttta
gtgaatgtggaatggaacatttgccaagattgtaagacagacaataaagtaaaagataaa
tctgaagaagaaacagaagaaaatccttcagtttggctgtgccttaaatgtggccatcag
ggctgcggcagaaattctcaggagcagcatgccttgaagcactatatgacgccgagatct
gaacctcattgtctggttcttagtttggacaactggagtgtatggtgttacctatgtgat
gatgaggtccagtattgtaattcaaaccgattgggtcaggtggttgattatgttagaaaa
caagccggtattacagctccaaaatcagcagcaaaagatagtggtaatattgaacttgaa
aataaaaaactagaaaaggagagtaaaaatgaacaagagagagaaaaaaaggaaaacatg
gctaaagaaaatccttccatgaattctacttcccaaataactgtgaaaggactcagtaat
ttgggaaatacatgtttcttcaatgcagttatgcagaatttgtcacaaacacccgtgctt
agagaactactaaaagaagtaaaaatgtctggaacaattgtaaaaattgaaccacctgat
ttggcattaacagaacccttagaaataaaccttgagcctccaggccctcttactttagcc
atgagccagtttcttaatgagatgcaagagaccaaaaagggaatcgtgacacctagagaa
ctcttttctcaggtctgtaaaaaagcagtgcgatttaaaggctatcagcagcaagacagc
caggagctgcttcgctatttattggatggaatgagagcagaagaacatcaaagagtgagt
aaaggaattcttaaagcatttggtaattctactgaaaaattggatgaagagctaaaaaat
aaagttaaagattatgaaaagaaaaaatcagtaccaagttttgtggaccgagtatttggt
ggtgaactaactagtacaatcatgtgtgatgaatgcagaactgtctccttggttcatgaa
tcgttccttgatttgtctctaccggttttagacgatcagagtggtaagaaaagtataaat
gataaaaatctgaaaaagaccatggatgatgaagataaagaaagtgaggaagaaaaagat
aatgacagttacataaaggagagaaatgatattctttcaggaacaagtaagcacttacag
aaaaaagcaaagaagcaagccaaaaagcaagccaagaaccaacgaaggcaacaaaaaatt
caaggaaaagttcttcatttaaatgatatctatgccattgaccatcctgaaggtaatgaa
tgtgaagttgaaatgtcacttcagcgagaagtggatattaaatccaaccatatttcacaa
gaggaagttatacataaagaatattgtgttaatcagaaagatttgaatggccatgaaaaa
atgatagaaagcataactgacaatcaaaaatccacagaggaagtagatatgaaaaatgtc
aacatggataatgatctgaaggttttggcatctcctgctgaatgtactaggaatttaaat
ggtgcctacatgaaggaagggagcagtggagaagtggacatttccagtggatttaagaac
cttaacttgaatgctgctcttcaacctgacgaaataaatttagagattctgaatgacgat
catactcccgggatgaaagtatatgaggttgtaaacgaagatccagaaactgctttctgt
actcttgcaaacagggaagctttcagtactgatgaatgttcaatccaacattgtttatat
cagttcacccgaaatgagaaacttcgagatgctaataaactgctttgtgaagtgtgcaca
cggagacagtatagtggaccaaaggcaaatataaaaggtgagaagaaacacgtttacacc
aatgctaagaagcagatgctaatttcccttgctcctcctgttcttactcttcacttaaag
agatttcagcaggctggttttaacctacgcaaagttaacagacacataaaatttccagaa
atcttagatttggctcctttttgtacccttaaatgtaagaatgttgctgaagaaaataca
agggtactatattccttatatggagtcgttgaacacagtggtaccatgaggtcggggcat
tacactgcctatgccaaggcaagatctgcaaacagtcatctctctaatcttgttctccac
ggtgatattctacaggattttgaaatggaatcaaccaaaggacagtggtttcacatcagc
gacacacatgtgcaagctgtgcctacaactaaagtactaaattcacaggcttacctccta
ttttatgagagaatactgtaa
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