Phocoena sinus (vaquita): 116754157
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Entry
116754157 CDS
T07759
Symbol
STX18
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-18
KO
K08492
syntaxin 18
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04130
SNARE interactions in vesicular transport
psiu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116754157 (STX18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116754157 (STX18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116754157 (STX18)
Membrane trafficking [BR:
psiu04131
]
SNARE
Syntaxin (Qa)
Stx-rER
116754157 (STX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6279
Phage_CP76
Med11
TipAS
DUF4559
DUF6176
FlgN
Motif
Other DBs
NCBI-GeneID:
116754157
NCBI-ProteinID:
XP_032488338
Ensembl:
ENSPSNG00000011864
LinkDB
All DBs
Position
5:37837526..37960886
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AA seq
335 aa
AA seq
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MAVDITLLFRASVKTVKTRNKALGVAVGGGVEGSRDELFRRSPRPKGDFSSRAREVISHI
GKLRDFLLEHRKDYINAYSHVMSEYGRMTDTERDQIDQDAQTFMRTCSEAIQQLRTQAHK
EIHSQQVKEHRSAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRQS
MSSEKVSQNPSKDSEERPVTEEFPEKIPAEAQPELGTWGDGKGEDELSPEEIQMFEQENQ
RLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE
DIREAIKNNAGFRVWVLFFLVMCSFSLLFLDWYDS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacatcacactgctgttccgggccagcgtcaagaccgtgaagacgcgcaac
aaagcgctgggagtggcggtgggcggcggggtcgagggcagccgcgacgagctgttccgc
cggagcccccggcctaagggcgacttctccagccgggcgcgcgaagtgatttcacacatt
ggcaaactgagagattttcttctcgaacacaggaaagattatattaatgcttatagccat
gtcatgtccgaatatgggagaatgacggacacagaacgagaccagatagaccaggatgct
cagacattcatgaggacctgctcagaagcgatccagcaactgagaacacaagcccacaag
gagatacattcccagcaagtgaaggagcacaggagtgctgttttggatttcattgaagat
tacttaaaaagagtatgtaaactttactcagaacaaagagccatccgagttaagcgagtg
gtggacaagaaaagattatctaagctggaaccagaaccaaatacaaagacaagacaatcc
atgtcttctgagaaagtttcacagaatccttcaaaagactctgaagaaagacctgtcact
gaagaatttccagaaaagattccggccgaagcacaacctgaattgggaacctggggagat
gggaaaggtgaagatgaattatccccagaagaaatacaaatgttcgaacaagaaaatcag
cgcctgattggtgaaatgaacagcctgtttgacgaagtgaggcaaatcgaagggaaagtg
gttgaaatttccagactccaagagatattcacagagaaggttttacaacaagaagctgag
attgacagtattcaccaattagtagtaggagcaactgagaatatcaaggagggcaatgaa
gacatcagagaggccatcaagaacaacgctggcttccgcgtgtgggtgctcttcttcctg
gtgatgtgctccttctccctgctcttcctcgactggtacgacagctag
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