Phocoena sinus (vaquita): 116755192
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Entry
116755192 CDS
T07759
Symbol
TBC1D2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116755192 (TBC1D2)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116755192 (TBC1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH
PH_11
PH_8
Motif
Other DBs
NCBI-GeneID:
116755192
NCBI-ProteinID:
XP_032490115
Ensembl:
ENSPSNG00000010292
LinkDB
All DBs
Position
6:33829182..33871556
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AA seq
999 aa
AA seq
DB search
MGVASSRYWAFHQGDAHTAASRVPPSSPGGGSPLALPLSGKLTLGRYHLSFRDLTGVGPQ
TSSPSTMDSTQEKPTESSSLVPGSEEPAGLARDPEVLPPKESEGCVRPLETAPKKICGYL
SKFGGKGPIRGWKSRWFFYDERKCHLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGTFE
IKTPSRIITLKAATKQAMLYWLQQLQMKRWEFHNSPPAPPAVPDAALAGNGPALRLELEQ
EEAELEEFLCPVKTPTGLVGMAAALQPVPPMPLALQNISLKHLGTEIQNTMYNIRGNKQT
QGTGHRPSGEDSSLSEEPQREEQPSPDLSAPGKDPADSPKPTPKSSLTANLIQKAKRQSN
TFPLFTEGLTRNRTAQEKVLALEQQVLMLTKELKAQKELVKILHKALEAAQQEKRVSSAY
LAAAEDKDRLELVRHKVRQIAELGKRVEALEQERESLVQTASLREQQVQELRQHVQLLLD
KNQAKQEVIQKLSEKVTQDFMHPPNQPPAPPDAADRDLLSQQEKMEHLKDDMEAYRTQNR
FLNSEIHQVTRIWRKVAEKEKALLMKCAYLQAKNCQVESKYLAGLRRLQEAVGVEAGECS
ELLRQLIQEALQWEASEASADSVVLSPISEYDEYGFLTVPNYEVEDLRLLAKIQVLEVHS
HHLLAHEAVEQPLWERWAALDELAPSAEIKQLLRAGVPREHRPRVWKWLVRLRVQHLQGP
GRYQELLSRSQACKHPAARQIELDLNRTFPSNKHFTCPASSFPDRLRRVLLAFSWQNPAI
GYCQGLNRLAAIALLVLDEEESAFWCLVAIVETIMPADYYSKTLLASQVDQRVLQDLLSE
KLPKLMAHLGQHRVDLSFVTFNWLLVVFADSLISNILLQVWDAFLYEGTKVVFRYALAIF
KYNEEEILRLQDGLEIYQYLRFFTKTICNSRKLMNIAFNDMNPFPMKQLRQLRMAHRERL
EAELHELEQLKAKYLETRAAQGPAVPEGCTSEDEGEAEP
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggccagcagccgctactgggctttccatcaaggagacgcacacaccgcagcc
agccgcgtccctccgtcgtctcctgggggtgggtcaccactggctctgcccctgtccgga
aagctcactcttggaaggtatcacctgagtttccgagatttgaccggcgttgggccgcag
acctccagtccctcgacgatggatagcacccaggagaaacccacggagtctagttccctc
gtccccgggtccgaagagcctgccggcttagccagggaccccgaagtgttgcctcccaag
gagtcggaaggctgcgtccggcccctggagacggcccccaagaaaatctgtggatattta
agtaagtttggcggcaaagggcccatccggggctggaaatcccgctggttcttctacgac
gagaggaaatgccacctgtattattcgcggaccgcgcaggatgcaaatcccttggacagt
atcgacctctccagtgcagtctttgactgcaaggccgacgccgaggaggggactttcgaa
atcaagactcccagccggattattaccttgaaggccgccaccaagcaagcgatgctatac
tggcttcagcagctgcagatgaagcgctgggagttccacaacagcccgcctgcacctccc
gccgtccctgacgctgccctggctgggaatgggcccgcattgcgcctcgagctagagcaa
gaggaggcggagctagaggagttcctgtgtcccgtgaaaacgcccactggccttgtgggc
atggcagctgccttgcagccggtccctcctatgcccttggcccttcagaatatctccctc
aagcacctgggaactgaaatacaaaacacaatgtacaacatccggggcaacaagcagacc
caaggaacaggccacagaccctcaggagaagattcttcactgagcgaggagcctcagagg
gaggagcagccctctcctgacctcagcgccccaggaaaagatccagcggattctccaaag
cctacacccaagtcctctctgaccgccaatctcattcagaaagccaagcgccagagcaat
accttcccgctcttcaccgagggactcacacggaaccgaaccgcccaggagaaagtgctg
gccttggagcagcaggttctgatgctcaccaaggagctaaaggctcagaaggagctggtg
aagatcctgcacaaggcgctggaggctgcccagcaggagaagagggtgtccagtgcgtac
ctggcagcagccgaggacaaggaccggctggagctggtgcggcacaaagtgcggcagatc
gcggagctgggcaagagggtggaggccctggaacaggagcgggagagcctggtgcagacg
gcgagcctgcgggagcagcaggtgcaggagctgcggcagcacgtgcagctgctcctggac
aagaaccaggctaagcaggaggtcatccagaaactctctgagaaggtcacccaggacttc
atgcatccccccaaccagccccctgcacccccagatgcagctgacagggacctcctgagc
caacaggaaaagatggagcacctgaaggatgacatggaagcataccggacccagaaccgc
tttctcaactccgagatccaccaggtcacaaggatctggagaaaggtggctgagaaggag
aaggccctcctgatgaagtgtgcctacctccaagccaagaactgccaggtggaaagcaag
tacctggcggggctgcggaggctgcaggaggccgtgggggtcgaggcaggcgagtgctcg
gagctactgaggcagctcatccaggaggcgctgcagtgggaagccagcgaggcctcagct
gacagcgttgtgctgagccccatcagcgagtatgacgagtacggcttcctgacagtaccc
aactatgaggtggaagatctgaggctgctggccaagatccaggtgctggaagtgcactcc
caccacctgctggcccacgaagccgtggagcagccgctgtgggagcgctgggctgccctg
gatgagctggccccctcggcggagatcaagcagctgctgcgggcgggcgtaccccgcgag
catcgcccacgcgtctggaaatggctggtccgcctccgtgtccagcacctgcagggcccc
ggccgctaccaggagctactgagccggagccaggcctgcaagcaccccgccgcacgccag
atcgagctggacctgaaccggaccttccccagcaacaagcatttcacctgtcccgcctcc
agcttccctgacaggctccgccgggtactgctggctttctcctggcagaaccccgccatc
ggctactgccagggcctaaacagactggcggccatcgctctgctggtcctggatgaggag
gagagtgccttctggtgtctggtggccattgtggagaccatcatgccagctgattactac
agcaagacgctcttggcatcccaggtggaccagcgagtgctgcaggacctcctctcggag
aagctgcccaaactgatggcccacctggggcagcaccgtgtggacctgtccttcgtcacc
ttcaactggctcctcgtagtcttcgcagacagtctcatcagcaacatcctcctccaggtc
tgggacgccttcctctacgagggcaccaaggtggtgttccgctatgccttggccatcttc
aagtacaacgaggaggagatcctgaggctgcaggatggcctggagatctaccagtacctg
cgcttcttcaccaagaccatttgcaacagtcggaagctgatgaacatcgccttcaacgac
atgaacccctttcctatgaagcagctacgccagctgcggatggcccaccgggagcggctg
gaggctgagctgcacgagctggagcagctcaaggccaagtacttggagacccgggcagcc
cagggccctgcagtgcccgagggttgcaccagcgaggatgagggagaggcagagccctga
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