Phocoena sinus (vaquita): 116756492
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Entry
116756492 CDS
T07759
Symbol
LCT
Name
(RefSeq) lactase-phlorizin hydrolase isoform X1
KO
K01229
lactase-phlorizin hydrolase [EC:
3.2.1.108
3.2.1.62
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00052
Galactose metabolism
psiu01100
Metabolic pathways
psiu04973
Carbohydrate digestion and absorption
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
116756492 (LCT)
09150 Organismal Systems
09154 Digestive system
04973 Carbohydrate digestion and absorption
116756492 (LCT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psiu03110
]
116756492 (LCT)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.62 glycosylceramidase
116756492 (LCT)
3.2.1.108 lactase
116756492 (LCT)
Chaperones and folding catalysts [BR:
psiu03110
]
Intramolecular chaperones
Others
116756492 (LCT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_1
Motif
Other DBs
NCBI-GeneID:
116756492
NCBI-ProteinID:
XP_032492786
Ensembl:
ENSPSNG00000015477
LinkDB
All DBs
Position
7:94824830..94877613
Genome browser
AA seq
1928 aa
AA seq
DB search
MELVWHLVLIVLLSFSCWGLDWESDRNLISAAGPLTSDLLRNLRGPLGNQDSPFVTGDKE
IYVCRQPLPSFLPEYFSSVRAIMITHYKVFLPWAQLLPEGTSKNPDKETVQCYRQLLEAL
KSAQLQPLVVLHHQTLPASTVQRTEAFADLFADYASFIFHSFGDLVEIWFTFSDLEEVIM
ELPHQESRSSRLQILTDAHRKAYEIFHEKYASQGQKLSVVLRAQVVSELLLEPSTSALAK
DAVDFLSLDLSYGCQSEAGFRQKLSQLQTIEPKVEVFIFNLKLQDCLSTKKNPADLFFSL
LTAISEEQVLTIGFDLSTFLSCSSSSKKSWSCSLTDNLTLQTLLQLDPETAVDSSLPHSA
YQRVWEMFANQSRAERDAFLQDVFPEGFLWGVSTGAFNVEGGWAEDGRGASIWDRVGHQN
TGKGQATPEVASDSYHKVDTDVALLRGLRAQVYKFSISWSRIFPTGQGQSPNLRGVAYYN
MLIDRLLDSHIEPMATLSHWDLPQALQDRGGWQNESMVDTFLDYAAFCFSTFGDRVKLWV
TFHEPWVMSYAGYGTGQHAPGISGPGVASFKVAHVVLKAHARAWHHYNSQHRPQQQGRVG
IVLNSDWAEPLSPGRPEDRRASERFLHFMLGWFAHPIFVDGDYPAALRAQIQQTNKQCPS
PVAQLPKFTEAEKQLLKGSADFLGLSHYTSRLISKAQGDTCIPSYDTIGGFSQHVDPAWP
QTESPWIRVVPWGIRRLLQFVSLEYTRGKVPIYLAGNGMPIGESEDLINDSLRIDYFNQY
INEVLKAVKEDSVDVQSYIARSLIDGFEGPSGYSQRFGLYHVNFNDSSRPRTPRKSAYFF
TSMIEKNGFLTKVVKRLPPSSKANVPRKIRAFTFPSEVPSKAKVVWEKFSNQPKFERDLF
YHGTFRNDFLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKNSATGDIACDSYNH
LDADLNMLRALKVKAYRFSISWSRIFPTGRNTSVNIRGVDYYNRLIDGLVASSISPMVTL
FHWDLPQALQDIGGWENPSLIELFNSYADFCFQTFGDRVKFWMTFNDPTSQAWLGYGSGE
FPPNVNDPGWGPYRIGHAIIKAHARVYHTYNEKYRQEQKGVISLSLGARWAEPQSPGVPR
DVEAADRMLQFSLGWFAHPIFRNGDYPDAMKWKVGNRSELQHLATSRLPSFTEEEKRYIS
ATADVFCLNTYSSRIVRYATPTLNPPSYEDDRELTEREDSSWPSTAVNRAASWGMRRLLN
WIKEEYGDVPIYITENGAGLTDPKVEDTNRMFYHKTYINEALKAYRLDGVDLRGYAAWSL
MDSFEWLNGYTVKFGLYHVDFNNVNRPRTARASARYYTEVIISNGMPLPKEDEFLYGQFP
KGFSWSVATASYQIEGAWRADGKGLSIWDTFSHTPLRVGNDDTGDVACDSYHKIAEDVVA
LQNLGVTHYRFSISWTRILPDGTTKYINEAGLNYYMRLIDALQAASIQPQVTIYHWDLPQ
ALQDIGGWENETVVQRFKEYADVLFQRLGDKVKFWITLNEPFVTANQGYGYGTAAPGISS
RPGTGPYIAGHNLIKAHAEAWHLYNDVYRARQGGMISITISSDWAEPRDPSNQEDVEAAR
RYVQFMGGWFAHPIFKNGDYPEVMKTRVRDRSLAAGLNKSRLPEFTESEKRRINGTYDFF
GFNHYTTVLAYDVNYASWISSFDADRGVASITDRSWPDSGSFWLKMTPFGFRRILNWLKE
EYNNPPIYVTENGVSQREESDLNDTARIYYLRSYINEALKAVQDKVDLRGYTVWTLMDNF
EWATGFAEKFGVHFVNYTDTSLPRIPKASAKFYASIVRCNGFPDPAAGPHPCLQQDAEPT
ASPMREEDVQFLGLRLGTTEAQTALYVLFALMLLGVSGVAFLSYKYCKRSKQKQTQPGEQ
ELSRSSSL
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggagctagtctggcatttagtccttattgtcctcctaagtttttcttgttgggggtta
gactgggaatctgatagaaacttaatttcagctgctggtcctctaaccagcgacttgcta
cgcaacctgaggggtccactgggaaaccaggattctccctttgtaacaggagacaaagaa
atttatgtttgtcgccagccactgccctctttcctgccagagtactttagcagtgttcgt
gccattatgatcactcattacaaagtatttctgccgtgggcacagctactcccagaagga
acctccaagaacccagacaaggaaacagtgcagtgctaccggcaactccttgaggccctc
aagagtgctcagcttcagcccctggtggtcctgcaccaccagactcttcctgccagcacc
gtccagagaactgaggcctttgctgatctctttgctgactatgcctccttcatcttccac
tcctttggggacctagttgagatctggttcacttttagtgacttggaggaagtgataatg
gagcttccccaccaggaatcaagatcttcacgtctccagatcctcactgacgcccacaga
aaagcctatgagattttccatgaaaaatatgcttctcaaggccaaaagctctctgtggtc
ctgcgagcccaggtggtctccgagctcctgctagaaccatctacgtctgcacttgccaag
gacgcagttgacttcctctctctagatttatcttatggatgccaaagtgaggcaggtttc
cggcagaagctgagtcaattgcagactattgagccaaaagtggaagttttcatcttcaat
ctgaaactccaggactgcctctccacaaagaagaacccagctgatctgttcttcagcctt
ctcacagccataagtgaagaacaagtgctcaccattgggtttgatcttagtacattcctg
agctgttcatcaagttccaagaaaagctggtcttgttctctgactgacaacctgaccctc
cagactctcctgcagctggacccggagacagcagtagactcctctctgccccactcagcc
tatcagagagtctgggaaatgtttgccaaccagtccagggcagaaagggatgctttcctg
caggatgtttttcctgagggtttcctctggggcgtctccacaggggcttttaatgtggaa
ggaggctgggccgaggacggaagaggggcgagcatctgggacagagtcgggcaccagaac
actggcaagggccaagcaacgccagaggtggccagtgacagttaccacaaggtagacact
gacgtcgccctgcttcgtggcctccgggcccaggtctacaagttctccatctcctggtcc
cgcatcttccccactgggcaggggcagagccccaacctccggggcgtcgcctactacaac
atgctgatcgacaggctgctggactcgcacatcgagcccatggccacgctgtcccactgg
gacctgcctcaggccctgcaggatcgcggcgggtggcagaatgagagcatggtggatacc
ttcctggactatgcggccttctgcttctccacatttggggaccgtgtgaagctgtgggtg
actttccacgagccgtgggtgatgagctacgcaggctacggcaccggccaacacgcaccg
ggcatctccggcccaggggtggcctcttttaaggtggctcacgtggtcctcaaggctcat
gccagggcttggcaccactacaacagccaacatcgcccacagcagcaggggcgggtaggc
attgtactgaactcagactgggcagagcccctgtccccagggaggcctgaggaccggaga
gcctctgaacgcttcctgcacttcatgctgggctggtttgcacaccccatctttgtggat
ggagactacccggctgccctgagagcccagatccaacagacgaacaaacagtgccccagt
cctgtggcccagctccctaagttcaccgaggcagagaagcagctcctgaagggctccgct
gactttctgggtctgtcccattacacttcccgcctcatcagcaaggcccagggagatacc
tgcatccccagctatgataccattggaggcttctcccaacacgtggaccctgcgtggccc
cagaccgaatccccttggattcgtgtggtaccctggggtataaggaggctgttgcagttt
gtatccttggaatacacaagaggcaaagttccaatctacctggctgggaatggcatgccc
ataggggaaagtgaagatctcatcaatgattccttgagaattgactacttcaatcaatat
atcaacgaggtgctcaaggctgtcaaggaggactcagtggatgttcaatcttacattgct
cgttccctcatcgacggcttcgaaggcccctctgggtacagccagaggtttgggctgtac
catgtcaacttcaacgacagcagcaggccaaggactcccaggaaatctgcctactttttc
accagcatgattgaaaagaacggtttcctcaccaaggtagtaaaaagactgccaccatcc
agtaaagcaaacgtcccccggaaaatcagagccttcacgtttccatccgaggtaccctcc
aaggctaaagtagtctgggaaaagttctccaaccaacccaagtttgaaagagatttgttc
taccacggcacgttccggaatgacttcctgtggggcgtgtcctcgtcagcctatcagatt
gaaggagcttgggatgctgacggcaaaggccccagcatctgggataattttacccacaca
ccagggagcaacgtgaaaaacagtgctactggagacatagcctgtgacagctataaccat
ctggatgctgatctgaatatgcttcgagctttgaaggtgaaggcctatcgcttctccatc
tcctggtctcggattttcccgactggaagaaacacttctgtgaacatacgtggtgttgat
tactacaacaggctgattgatggcttggtggcaagcagcatctctcccatggtgacactg
ttccactgggacctgccccaggccctccaggatattggaggctgggagaatccttccttg
attgagttgtttaacagctatgcagacttttgtttccagacctttggtgacagagtcaag
ttctggatgacttttaatgaccccacatcccaggcatggttggggtatggctcaggggaa
tttcccccaaatgtgaacgacccaggctggggaccttacagaattggccatgcaatcatc
aaagctcatgccagagtctatcacacttacaatgagaagtacaggcaagagcagaagggg
gtcatctctttgagcctcggtgcacgctgggcagagccccagtcaccgggggtccccagg
gatgtggaggcagctgaccgaatgctgcagttctcactgggctggttcgcccaccccatc
ttccgaaacggagactatcccgatgccatgaagtggaaagtggggaacaggagtgaacta
cagcacttagccacctcccgcctgcccagcttcactgaggaagagaagaggtacatctca
gctacggccgacgtgttctgcctcaacacctactcctccagaatcgtgcggtacgcaaca
cccacgttaaacccaccctcctatgaagatgatcgggagctgaccgagagggaagactct
tcctggccctccacggcagtgaacagagctgcatcctgggggatgcgaagactgctcaac
tggatcaaggaagagtacggggacgtccccatttacatcactgaaaacggggcagggctg
acagatcccaaagtggaagataccaataggatgttttaccataaaacctatatcaatgaa
gctttgaaagcctacaggctcgacggtgtcgaccttcgaggatatgctgcatggtccctg
atggacagttttgagtggctaaatggctacacggtcaagtttggactgtaccatgttgat
ttcaataacgtgaacaggcctcgcacagcaagagcctctgccaggtactacacggaggtc
atcatcagcaacggcatgccgctgcccaaggaagacgagtttctctatggacagtttccc
aagggcttcagctggagtgtggctaccgcttcgtatcagatcgaaggtgcgtggagagca
gatggcaaagggctcagtatttgggacaccttttctcacacaccactgagggttgggaat
gatgacaccggagacgtggcctgtgacagttatcacaagattgctgaggatgtggtcgcc
ctgcagaacctgggtgtgacccactatcgcttttccatctcttggactcgcatcctccct
gacggaactaccaaatacatcaatgaagcgggcctgaactactacatgcggctcatcgac
gcgctgcaggctgccagcatccagccccaggtgaccatttaccactgggacctgccgcag
gcactccaggacattggaggctgggagaatgagacggttgtacagcggtttaaggagtat
gcagatgtgctcttccagaggctgggggacaaggtgaagttctggatcacactgaacgag
ccctttgtcactgctaaccagggctatggctatgggacagcagctccaggaatctcctcc
aggcctggcactggtccctacattgctggccacaacctaataaaggctcacgctgaggcc
tggcatctgtacaacgatgtgtaccgtgcccgtcaaggtggcatgatttccatcaccatc
agcagcgactgggctgagcctagagacccctccaaccaggaggacgtggaggccgccagg
agatacgttcagttcatgggaggctggttcgcacatccgattttcaagaatggggattac
cccgaggtgatgaagacacgggtccgtgacaggagcttggcggcaggcctcaacaagtct
cggctccctgagttcacagagagtgagaagaggaggatcaacggcacctatgactttttt
gggttcaatcactacaccactgtcctggcctacgatgtcaactatgcctcttggatctct
tccttcgatgcagacaggggagttgcctccatcacagatcgctcttggccagactctggc
tccttctggctgaagatgacacctttcggcttcaggaggatcctgaactggttaaaggag
gagtacaacaaccccccgatctacgtaacagaaaatggagtgtcccagcgggaagaatca
gacctcaatgacactgctaggatctactacctccgcagttacatcaacgaggcgctcaaa
gctgtgcaggataaggtggaccttcgaggatacacggtttggactctgatggacaacttt
gagtgggccacaggcttcgcagagaagttcggtgtgcatttcgtgaactatactgacact
tctctgccaaggatccccaaagcgtcggccaagttctacgcctccatagtccggtgcaac
ggcttccctgaccccgctgcagggccacacccttgtctgcagcaagatgctgagcccacc
gccagccccatgagagaagaggacgttcagttcctggggctcaggctgggtacaacagag
gcccagacagcactgtatgtactctttgctctaatgcttcttggagtctctggtgtggca
tttctgtcctacaagtactgtaagcgctccaagcaaaagcaaacacaaccaggtgaacag
gaattgagccgtagttcttcactctga
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integrated database retrieval system
