Phocoena sinus (vaquita): 116756855
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Entry
116756855 CDS
T07759
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu01100
Metabolic pathways
Module
psiu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116756855 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116756855 (CHPF)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116756855 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
116756855 (CHPF)
Glycosyltransferases [BR:
psiu01003
]
Glycan extension
O-Glycan
116756855 (CHPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
116756855
NCBI-ProteinID:
XP_032493780
Ensembl:
ENSPSNG00000016627
LinkDB
All DBs
Position
7:18451882..18456821
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AA seq
775 aa
AA seq
DB search
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAAR
RPNSVQPGAERERPGAGAGAGENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLL
VAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAPSGMAVVTLGEERPIGHLHLA
LRHLLEQHGNDFDWFFLVPDATYTEAYGLARLAGHLSLAAAAHLYLGRPQDFISGEPAPG
RYCHGGFGVLLSRTLLQQLRPHLEACRNDIVSAHPDEWLGRCILDATGVGCTGGHEGVHY
SYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQ
NTSRLAADGEWAATWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADQA
DVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRP
LTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAECDLAPGFLEAFAVAALEPGDSA
ATLTLLLLYEPRQAQRAAHADVFAPVKARVAELERRFPGARVPWLSVQTATPSPLRLMDL
LSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPP
ELGRDTGRFDRQAASEACFYNSDYVAARARLAAASEQEEELLESLDVYELFLRFSSLHVL
RAVEPALLQRYRAQTCSARLSEDLYHRCRQSALEGLGSRTQLAMLLFEQEQGNST
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatcgctgctgttgtcggtgctgcggcccgcagggcccgtggccgtgggcatc
tccctgggcttcactctgagcctgctcagcgtcacctgggtggaggagccttgtggccca
gggccgccccaacccggagattctgagctgccgccgcgcggcaacaccaacgcggcgcgc
cggcccaactcggtgcagcccggagcggagcgcgagaggcccggggccggtgcaggcgcc
ggggagaactgggagccgcgtgtcttgccctaccaccccgcacagcctggccaggccgcc
aaaaaggccgtcaggacccgctacatcagcacagagctgggcatcaggcagaggctgctc
gtggcggtgctgacctcacaggccacgttgcccacactgggcgtggctgtgaaccgcacg
ctggggcaccggctagagcgtgtggtgttcctgacaggctcgcggggccgccgggcacca
tcggggatggccgtggtgacgctaggcgaggagcggcccatcgggcacctgcacctggca
ctgcgccacctgctggagcagcacggcaacgactttgactggttcttcctagtgcccgat
gccacctacacggaggcgtacggactggctcgcctagctggccacctcagcctggcagcc
gctgcccacctctatctgggccggccccaggacttcatcagtggagagcccgccccaggc
cgctactgccacggtggctttggggtgttgctgtcacgcacgctgctgcagcagctgcgc
ccccacctggaagcctgccgcaacgacatcgtcagtgcgcacccggatgagtggctgggc
cgctgcatcctcgatgccaccggggtgggctgcactggcggccacgagggagtccactat
agctacctggagctgagccctggggagcccgtgcaggagggggaccctcgtttccgcagt
gccctgacagctcaccctgtccgtgaccctgtacacatgtaccagctgcacaaggctttt
gcccgagctgaactggaacgcacataccaggagatccaggagttacagtgggagatccag
aacaccagccgtctggcagcggatggggagtgggcagccacctggcccgtgggcatacca
gcaccgtcccgcccagcctcccgctttgaggtgctgcgctgggactatttcacagaacag
catgctttctcctgcgctgatggctcaccccgctgcccactgcgtggggctgaccaggct
gatgtggccgacgttctgggggcagccctggaggagctcaaccgccggtaccacccggcc
ctgcggctccagaagcagcagctggttaatggctaccgacgcttcgatcctgcccggggt
atggagtacacgctggacttgcagctggaggcattgaccccacagggtggccgccggccc
ctcacccgccgagtgcagctgctacggccactgagtcgcgtggagatcttgcccgtgccc
tatgtcaccgaggcctcgcgtctcaccgtgttactgccactggctgcagccgagtgtgac
ctggcccctggcttcctggaggccttcgccgtggccgcactggagcctggcgattctgca
gcaaccctgaccctgctgctactgtatgagccacgacaggcccagcgggcggcccacgcc
gatgtctttgcacctgtcaaggcccgtgtggcagagctggagcggcgtttccccggtgcc
cgggtgccctggctcagcgtgcagacagccacaccctcaccgctgcgcctcatggatctg
ctctccaagaagcacccactggacacgctgttcctgctggccgggccagacacggtgctc
accccggacttcctgaaccgctgccgcatgcatgccatctctggctggcaagccttcttt
cccatgcacttccaggccttccacccggccgtggccccaccccagggcccgggaccccct
gaattaggccgagacacaggccgctttgatcgccaggcggccagtgaggcctgcttctac
aactccgactacgtggcggcccgagcgcggctggcggcggcctcggagcaggaagaggag
ctcctggagagcctggatgtgtatgagctgttcctgcgcttctccagcctgcacgtgctg
cgggcggtggagcccgcgctgctgcagcgctatcgggcccagacgtgcagcgcgcggctt
agcgaggacctgtaccaccgctgccgccagagtgcgctcgagggcctcggctcccgcacc
cagctggccatgctgctgttcgagcaggagcagggcaacagcacctga
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