Phocoena sinus (vaquita): 116757482
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Entry
116757482 CDS
T07759
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116757482 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116757482 (USP47)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116757482 (USP47)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116757482 (USP47)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116757482 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
116757482
NCBI-ProteinID:
XP_032494993
Ensembl:
ENSPSNG00000004502
LinkDB
All DBs
Position
8:66123088..66245204
Genome browser
AA seq
1375 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQVENAAEEPRVLCIIQDTTNSKTVNERI
TLNLPASTPLRKLFEDVANKVGYINGTFDLVWGNGINSADMAPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEQPQILLEDSSAGDDSVHDKFIGPLPREGSVGSTSDYVSQSYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSGTEKIPKPGL
EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQRERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPMDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQSYKPGEVMVKVHV
VDLKAESVAAPITVRAYLNQTVTEFKQLISKAIYLPAETMRIVLERCYNDLRLLTVPSKT
LKAEGFFRSNKVFVESSETLDYQMAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
AYQKAGGDSGNVDDDCERVKGPAGGLKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKST
ETSDFENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
ESGKSRGEIQYMYFQAEPYAADESSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKF
LLDAVFAKGMTVRQSKEELIPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEVLDGAEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELRDKLC
EISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacaggtagaaaatgctgctgaagaa
ccaagagtcttatgtataatacaagatactactaattcaaagacagtgaatgaacggatc
actttaaatttgccagcttctacacctctcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttggtgtgggggaatggaatcaattctgctgat
atggctccactggatcataccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacaacctcaaatactgctggag
gattccagtgctggggatgacagtgttcatgacaaatttataggtccacttccaagagaa
ggttctgtgggctctaccagtgattatgtcagccaaagctactcctattcatctattttg
aataaatcagaaactggatatgtgggattagtaaaccaagcgatgacttgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataagtgggaa
tttgaagaatctgaagaagatccagtgacgagtataccataccaacttcaaaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgaaaccacagatgttacgaggagcttt
ggatgggatagtagtgaggcttggcagcagcatgatgtacaagaactgtgcagagtcatg
tttgatgctttggaacagaaatggaaacaaacagaacaggctgatcttataaatgaactg
tatcaaggcaagctgaaggactacgtgagatgtctggaatgtggttatgagggttggaga
atcgacacatatcttgatattccattggtcatccgaccttatgggtccagccaagcattt
gctagtgtggaggaagcattgcatgcatttattcagccagagatcctggatggcccaaat
caatatttttgtgaacgttgtaagaagaagtgtgatgcacgaaagggtcttcggtttttg
catttcccttatctgctgaccttacaactgaaaagatttgattttgattatacaaccatg
cacaggattaaattgaatgatcggatgacatttcccgaggaactagacatgagtacattt
attgatgttgaagatgagaaatctcctcagactgaaagttgcactgacagtggagcagaa
aatgaaggcagttgtcacagtgatcaaatgagcaatgatttctccaatgatgatggtgtt
gatgaagggatctgccttgaaagcaatagtggaactgaaaagattccaaaacctggactt
gaaaagaattctttgatctatgagctcttctcagttatggttcattcagggagtgctgct
ggtggtcattactatgcttgtataaagtcattcagtgatgagcagtggtacagcttcaat
gatcaacatgtcagcaggataacacaagaggacattaagaaaacacatggtggatcttca
ggaagcagaggctattactccagtgcttttgcaagctccacaaatgcatatatgctgata
tatagactgaaggacccagcaagaaatgcaaaatttctagaagtagatgaatatccagaa
catattaaaaatttggtgcagagagagagagaattggaagaacaagaaaagaggcaacga
gaaattgagcgcaatacatgcaagataaaattattctgtttgcatcctgtgaaacaagtg
atgatggaaaataaattggaggttcataaggataagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagaggtgatacctatggattgctgtcgtcttgttaaa
tatgatgagtttcatgattatcttgaacgatcatatgaaggagaagaagatacgccaatg
ggacttttactgggtggagtcaagtcaacatacatgtttgatctgctgttggagacaaga
agacccgatcaggttttccagtcttacaaacccggagaagtgatggtgaaggttcatgtt
gttgatctaaaggcagaatctgtagctgctcctatcactgttcgagcttacttaaatcaa
acagttacagagttcaaacagcttatttcaaaggccatctatttacctgctgaaacaatg
agaatagtgctggaacgctgctacaatgatttgcgtcttctcactgtgcccagtaaaacc
ctgaaagctgaagggttttttagaagtaacaaggtgttcgttgaaagttctgagactttg
gattaccagatggcctttacagactctcatttatggaaactcctggatcggcatgcaaat
acaatcagattatttgttttgttacctgaacaatctccaggatcttattccaaaaggaca
gcataccagaaagctgggggtgactctggtaatgtggatgatgactgtgaaagagtcaaa
ggacctgcagggggtctaaagtctgtggaagctattctagaagaaagcactgaaaaactc
aaaagcttgtcactgcaacagcagcaggagggagataatggggacagcagcaaaagtact
gagacaagtgactttgaaaacattgaatcacctctcaatgagagggactcttcagcctca
gtggataatagagaacttgaacagcatattcagacttccgatcctgaaaattttcagtct
gaagaacgatcagattcagatgtgaataatgacaggagtacaagttcagtggacagtgac
attcttagctcaagtcatagcagtgatactttgtgcaatgcagataatgctcaaatccct
ttggctaatggacttgactctcacagcatcacgagtagtagaagaactaaagcgaatgaa
gggaagaaggagacatgggatacagcagaagaagactccggaacggacagtgaatatgat
gagagtggcaagagtaggggagaaatacagtacatgtatttccaagcagaaccctatgct
gcagatgaaagttctggggaaggacataaatggttgatggtgcatgttgataaaagaatt
actctggctgctttcaaacaacatttagagccctttgttggagttttgtcctctcacttc
aaggtctttcgcgtgtacgccagcaatcaagagtttgagagcgtccggctgaatgagaca
ctttcatcattttcagatgacaataagattacaattagactggggagagcacttaaaaaa
ggagaatacagagttaaagtgtaccagcttctagtcaatgaacaagagccgtgcaagttt
ctgctagatgctgtgtttgctaaaggaatgactgtacggcaatcaaaagaggagttaatt
cctcagctcagggagcaatgtggtttagagctcagtattgacaggtttcgtctaaggaaa
aaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaagatatt
aatatttccagcaactgggaggttttccttgaagttcttgatggggcagagaagatgaaa
tccatgtcacaacttgcagttttgtcaagacggtggaggccttcagagatgaagttggat
cccttccaggaggttgtgttggaaagcagtagtgttgatgagttgcgagacaagctttgt
gaaatcagtggaattcctttagaagatattgaatttgccaagggtagaggaacttttccc
tgtgatatttctgtccttgatattcatcaggatttggactggaatcctaaagtttctacc
ctgaatgtctggcctctttatatctgtgatgatggtgcagtcatattttatagggataaa
acagaagaattaatggagttgacagatgagcaaagaaatgaactgatgaaaaaagaaagc
agtcgactccagaagacgggacatcgtgtaacgtactcacctcggaaagaaaaagcacta
aaaatatatctggatggagcaccaaataaagatctgactcaagactga
DBGET
integrated database retrieval system
