Phocoena sinus (vaquita): 116760199
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Entry
116760199 CDS
T07759
Symbol
RBFOX2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116760199 (RBFOX2)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116760199 (RBFOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116760199
NCBI-ProteinID:
XP_032500564
Ensembl:
ENSPSNG00000006691
LinkDB
All DBs
Position
10:11879075..12139389
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AA seq
450 aa
AA seq
DB search
MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGGGGDGAEPGLSKRPRTEEAAADGGGM
QNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYA
GQTSEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTEGQQSQTQSSENSESKSTP
KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKL
HGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLG
NDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVP
PTAIPAYPGVVYQDGFYGADLYGGYAAYRYAQPATATAATAAAAAAAAYSDGYGRVYTAD
PYHALAPAASYGVGAVASLYRGGYSRFAPY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcgcccagccgcagcagccgcctcagctcgggcccggcgccgctgcccgg
gggatgaagcgggagtcggagctggagctgccggtgcccggagggggaggagacggagcc
gaacccggcctgagcaagcggccgcgcaccgaggaggcggcggccgacggtggcgggatg
cagaacgagcctctgaccccaggttatcatggattcccagcacgggacagccagggtaac
caggagccaacaacaactcctgacgcaatggttcagccttttactaccatcccatttcca
ccacctccgcaaaatgggattcccacagaatacggagtgccacacactcaggactatgcc
ggccagaccagtgagcataacctgaccctctatggaagcacgcaagcccacggggagcag
agcagcaactcacccagcacacagaacggatctctgacgcagacagaagggggcgcacag
acagaaggccagcagtcacagacgcaaagtagtgaaaattcagagagtaaatctacccct
aaacgcctgcatgtctctaatattcctttccgcttccgggatcctgacctccggcagatg
tttgggcagtttggcaaaatcctagatgtagaaataatctttaatgaacgtggctctaag
ggattcgggttcgtaactttcgagaatagtgctgatgcagacagggccagggagaaatta
cacggcaccgtggtagagggccgtaaaatcgaggtgaataatgctacagcacgtgtaatg
accaataagaagatggtcacaccatatgcaaatggttggaaattaagcccagtagttgga
gctgtatatgggcccgagttgtatgcagcatccagctttcaagcagatgtgtccctaggc
aatgatgcggcagtgcccctgtcaggaagagggggcatcaacacttacattcctttaatc
agtctccctttagttcctggcttcccttacccaactgcagccaccacggcggccgctttc
agaggagcccacctgaggggcagggggcggacagtatacggtgcagtccgagcggtacct
ccaacagccattcccgcctatccaggtgtggtttaccaggacggattttacggtgctgac
ctctatggtggatacgcagcctacagatacgcacagcctgctactgcaaccgctgccacc
gccgccgccgccgccgccgccgcttatagcgacggttatggcagggtgtacacggccgac
ccctaccatgccctcgcccctgccgctagctatggagttggcgctgtggcgagtttatac
cgaggtggctacagccgatttgccccttactga
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