Phocoena sinus (vaquita): 116761079
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Entry
116761079 CDS
T07759
Name
(RefSeq) keratin, type II cytoskeletal 5
KO
K07605
type II keratin, basic
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116761079
04147 Exosome [BR:
psiu04147
]
116761079
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
116761079
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116761079
Exosomal proteins of other body fluids (saliva and urine)
116761079
Exosomal proteins of colorectal cancer cells
116761079
Exosomal proteins of bladder cancer cells
116761079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
CENP-F_leu_zip
TPR_MLP1_2
ATG16
COG6_N
Baculo_PEP_C
Alanine_zipper
DUF745
DASH_Duo1
KxDL
Bap31_Bap29_C
VPS51_Exo84_N
Taxilin
Mce4_CUP1
Lebercilin
COG5_N
Motif
Other DBs
NCBI-GeneID:
116761079
NCBI-ProteinID:
XP_032502694
Ensembl:
ENSPSNG00000006318
LinkDB
All DBs
Position
10:61693398..61699980
Genome browser
AA seq
584 aa
AA seq
DB search
MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGGGGFGRVSLGGAYGMGG
YGSRSLYNLGGSKRISISSSGGGFRSRSCATGAGGGYGFGGGAGGGFGLGGGAGGGFGLG
GGAGFGGGYGGSGFLTCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVKTEEREQIKTLNNR
FASFIDKVRFLEQQNKVLETKWALLQEQGTKTVRQNLEPLFEQYINNLRRQLDGILGERG
RLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVEALMD
EINFLKMFFEAELSQIQTHVSDTSVVLSMDNNRCLDLDSIIAEVKAQYEEIANRSRTEAE
SWYQTKYEELQQTAGRHGDDLRTTKQEISEMNRMIQRMRSDIDNVKKQCSNLQNAVADAE
QRGELALKDARNKLAGLEDALQKAKQDMARLLKDYQELMNTKLALDVEIATYRKLLEGEE
CRLSEGIGPVNISFVTNTVSSGYGGSGSFGSGLGGGLGSGLGGGGSGFYSSSSGGVGLGS
GLGVGGSSFSAGSGRSLGFSSGGGSSSNVKFVSTTSSSRKSFKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagtcgagtgtgtccttccggagcgggggcagccgtagcttcagcactgcc
tctgccatcaccccgtctgtctcccgcaccagtttcacctccgtgtcccggtccgggggt
gggggtggaggtggcggctttggcagggtcagccttgggggtgcttatggcatgggtggc
tatggcagccggagcctctacaacctggggggctccaagaggatctccatcagcagtagc
ggcggtggcttcaggagccgaagttgtgccaccggtgctggaggcggctatggctttgga
ggtggagctggtggtggctttgggctcggtggtggagctggtggtggctttgggctcggt
ggtggagctggctttggtggtggctatgggggctctggtttcctcacctgcccccctgga
ggcatccaagaggtcaccgtcaaccagagtctcctgactcccctcaacctgcaaatcgac
cccaccatccagcgagtcaagactgaggagcgggagcagatcaagaccctcaacaacagg
ttcgcctccttcatcgacaaggtgcggttcctggagcagcagaacaaggtcctggaaacc
aagtgggccctgctgcaggagcagggcaccaagaccgtgaggcagaacctggagcctttg
ttcgagcagtacatcaacaatctcaggagacagctggatggtatcctgggggagagaggc
cgcctggactcagagctgagaaacatgcaggacttggtggaagacttcaagaacaagtat
gaagatgaaatcaacaagcgtaccaccgccgagaatgagtttgtgatgctgaagaaggat
gtggatgccgcctacatgaacaaggtggaactagaggccaaggtcgaggcattgatggac
gagatcaacttcttgaagatgttctttgaggcagagctgtcccagatacagacgcacgtc
tcagacacgtctgtggtcctgtccatggacaacaaccgctgcctggacctggacagcatc
atcgccgaggtcaaggcccagtacgaggagatcgccaaccgcagccgcacagaagccgag
tcctggtaccagaccaagtacgaggagctgcagcagactgcgggccggcatggcgatgat
ctccgcaccaccaagcaagagatctccgagatgaacaggatgatccagaggatgaggtcc
gatattgacaacgtcaagaagcagtgttccaacctgcagaacgccgtcgccgatgcagag
cagcgtggggagctggccctcaaggacgccaggaacaagctggccgggctggaggacgcc
ctgcagaaggccaagcaggacatggcacggctactgaaggactaccaggagctcatgaac
accaagctggccctggacgtggagatcgccacctacaggaagctgctggagggcgaggag
tgcagactgagtgaaggaattggaccagtcaacatctcttttgtcacgaacaccgtctcc
tctggctacggcggtagcggcagctttggcagcggccttggcggtggtcttggcagcggc
cttggtggaggcggcagcggcttctactccagcagcagcgggggcgtcggcctaggcagt
gggctcggtgtggggggctccagcttcagtgcgggcagtggccgaagcctgggctttagc
agtggcgggggcagcagctccaatgtcaagtttgtctccaccacctcctcctcccggaag
agcttcaagagctaa
DBGET
integrated database retrieval system
