Phocoena sinus (vaquita): 116762194
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Entry
116762194 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: POM121-like protein 2
KO
K14316
nuclear pore complex protein Nup121
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116762194
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116762194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116762194
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116762194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
116762194
NCBI-ProteinID:
XP_032504827
LinkDB
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Position
11:complement(82569565..82580747)
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AA seq
585 aa
AA seq
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MGTYVGKLGLWPSSQAGGRTDLSERPLNRRPAQPLHQVPRVQQVHRAHPAPRHRPARSLP
NWDPTSPNACVVNEAWRRFPMNRSQNSIVGPLPSDWWESYFKGSIWSLQHPRATWSPVTR
RLAPREPPSTAPAEVANSAGVSPSEKXPDPCAKETVLRALGECKKGKVRWEEPLFHESLD
SKRRIPETRLSAFKPLTKNGVLTSFVPRPGPLKRSLDCWGSGHSLNNRPSCSSMDSLAST
HTGGPLSSQRNAITSSYSSSRDFSEAWKRSIPSTXLQIPEWPIKRKEHGHPSQSPVPLVS
DESPETSGSSGQQNQIPLLLSSPWSLLSLTPPPQLGYAVPEDLALGKKAGLQRSNKARED
TTEVTTDSVPDTWSAIQPPLSQGTDPQLESLHKMQKSPSPLAFPQPTGEAICVAHSPLKT
ASLLASRGCSQSEPLSGTSSDSKPTTTFILLTLVSPTAPVTDTTWPLXSLSGCHTPDSPA
IYPAAPTMQSTLFGLTSSPAPHLPASALLLQLLSALIRVSLLRCFHNAVKAKPPLLRKPR
LRAGIRRPTRLSHLGLPGRGGRSLPRVVLWAQRPVAYVGSKGGCL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttacgtgggcaagctgggactctggccgtcatcccaagcaggggggcgcaca
gacttgtcggagaggcccttgaaccgccggccagctcagccccttcatcaggttccccgg
gttcagcaagtccatcgtgcccaccctgcccctcggcacagacctgcgaggagcctgccg
aactgggatcctaccagtcccaacgcgtgcgtggtcaatgaggcttggaggcgctttccc
atgaacaggtcccagaattccatcgtggggcctcttccctcagactggtgggaaagttac
ttcaaggggagtatctggtctcttcagcaccccagggcaacatggagcccggtgaccagg
aggctcgctcctcgtgagcccccctccactgccccagcagaggtagcgaactctgcaggg
gtctcaccttctgagaagnccccagacccatgtgcgaaggagacagtgctgagggccctc
ggagagtgcaagaaggggaaagtcagatgggaagaaccacttttccatgagagcttggac
agtaagagaaggattccagagaccagactatctgcgtttaagcctctgacgaaaaatgga
gtcctcacttcttttgtgcccaggcctgggcctctgaagagaagcctcgactgctggggc
tcaggtcacagcttgaataacaggcccagctgctcctccatggactccttggccagcaca
cacacaggtggcccccttagctcccaaagaaatgctattacaagctcttacagctcttct
agagatttctctgaggcttggaagagaagtattcccagtacataactccagataccagag
tggccaataaaaaggaaagaacatggtcatccgtctcagtctccagtcccactggtatca
gatgagtccccagaaacatctggcagctctgggcaacaaaatcagattcccctgcttctg
tcaagcccctggagcctgctgtccctgactccgcctcctcagctgggttatgcagtcccc
gaagacctggccttagggaagaaagctggactccaacggagcaacaaagccagagaagat
acgactgaggtcaccacagactctgtccctgacacttggtctgctattcagcctcccctg
tcccagggcactgatcctcagctggaaagcttacataaaatgcagaagtctccaagtcca
ctggccttcccacaacctaccggagaggcaatctgtgtggcccactcgcctctgaagaca
gcgagcctgctggcctcacgtgggtgctcccagtcagagcccctttcaggcacctcttca
gactcaaaacccaccactactttcatccttctgacccttgtttctcccacagcaccagtc
actgacaccacgtggccacttnncagcctctcaggctgccataccccagactcacctgcc
atttaccctgcagcacccactatgcaaagcactttgtttggattgacgagcagcccagcc
ccccatcttcctgcatctgcactcctgttgcaacttctgtccgccttgatccgggtctct
ctgctcaggtgtttccacaacgcggtcaaggccaagccgccccttctccggaagcccagg
ctgcgcgccgggatccgtaggccgactcgcctcagccacctaggcttgcctgggaggggt
ggccgctcgctgccacgagttgtcctttgggcgcagagacctgtcgcttacgtgggttca
aagggcggttgcctttag
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