Phocoena sinus (vaquita): 116762868
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Entry
116762868 CDS
T07759
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116762868 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116762868 (POC1A)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116762868 (POC1A)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116762868 (POC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
PROPPIN
Nup160
Motif
Other DBs
NCBI-GeneID:
116762868
NCBI-ProteinID:
XP_032506264
Ensembl:
ENSPSNG00000006909
LinkDB
All DBs
Position
11:36714958..36810298
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AA seq
475 aa
AA seq
DB search
MEPAIQLSFQSGGKKPRRRVSFNRGGRGEAKRPALLLAAVGGAETERDATAAAASSGSSG
ALDAPGPAMAAPCLEDPSLERHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQS
RAYRFAGHKDTVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHMATVRSIHFC
SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKVW
DKTSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV
NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD
EQVMVWKSNFDVVNYGEVLRVQRPPATLASSSRTLPEVDSPVPPGRGRSQESMQSQPQEP
VSIPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRTPP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagccggccatacagctctccttccagtcggggggcaaaaagccgaggcgccgcgtc
tcctttaaccgcggtgggcggggcgaggcgaagcgacccgcgttgctattggcggcggtt
gggggcgcggaaactgaacgggacgcaactgcagccgctgcttcttcgggctcctctggc
gccttggacgcccctggccccgccatggccgcaccctgcctggaggacccctcgctggag
aggcattttaagggccaccgggatgcagttacctgtgtggacttcagtctcaacacgaag
cagctggccagtggctccatggactcatgcctcatggtgtggcacatgaaaccccagtca
cgtgcctaccgcttcgccggccacaaggacaccgtcacctgtgtgaacttctccccttcg
ggacacctgcttgcctcaggctcccgtgacaagactgtccgcatctgggtacccaacgtc
aaaggcgagtcaaccgtgtttcgtgcacacatggccacagtgaggagcatccatttctgc
agcgatggccagtccttcgtgacagcctccgacgacaagacagtcaaggtgtggtcaact
catcgccagaaattcctgttctccctgagccagcacatcaactgggtccgctgtgccaag
ttctccccggatgggcggctcatcgtgtctgccagtgacgacaagactgtcaaggtgtgg
gacaagaccagccgggagtgtgtccactcgtactgtgagcacggcagctttgtcacctac
gtggacttccaccccagtggcacgtgcatcgccgccgccggcatggacaacacggtgaag
gtgtgggacgtgcggactcaccggctcttgcagcactatcagttgcacagtgcggcggtg
aacgccctctccttccacccgtcgggaaactacttggtcacggcctccagtgactcaacc
ctgaagatcctggacctcatggagggccggctgctctacacgctccatggacatcagggt
ccagccaccactgttgccttttcaagaacgggggagtattttgcttctggaggttctgat
gaacaagtaatggtttggaagagtaactttgatgttgtcaattacggagaagtcctaaga
gtgcagaggcccccggccacgctggccagctcctccaggactctgccagaagtggattcc
cctgtcccaccaggcaggggcaggagtcaggagtcgatgcagagccagccccaagagccc
gtcagcattccgcagacactgaccagcacgctggagcacattgtaggccagctggacgtc
ctcacccagacagtctccatcctggagcagcggttgacactgacagaagacaagctgaag
cagtgtctggagaaccagcagctaatcatgcagagaacaccaccatga
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integrated database retrieval system
