Pseudomonas sp. TKP: U771_14050
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Entry
U771_14050 CDS
T02969
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psk
Pseudomonas sp. TKP
Pathway
psk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U771_14050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_14050
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U771_14050
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U771_14050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
AAA_25
DUF4350
DUF5351
Motif
Other DBs
NCBI-ProteinID:
AHC35334
LinkDB
All DBs
Position
3037366..3039885
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AA seq
839 aa
AA seq
DB search
MTSQRTLPPLTAQRPGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVY
AEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSS
LIRMLYSRAGHYPPGQAMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTIRQ
RAVASWPLAWQGQNLRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPEQ
TRDALKRKLEPSYQGTFSGARRYILHTFTHTQSALMKKRVAQFMQGSACPLCAGKRLTQA
ALSVKFAGVDIGELSQLSLVQLAELLRPVAAGQDTMKLSVEKRLAAQRIAQDLLERVSTL
IELGLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTA
LERLKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEHGGQVLYSGPPAGLAAVEASQIRE
YLFAERRPSTASQRPPQGWLQLEGVTRNNLNDLSVAFPLGCFTAVTGVSGSGKSSLVSQA
LLELVGSGLGRVPDNDEERSLEDDAPQTSGGHISAGLEHLRRLVQVDQKPIGRTPRSNLA
TYTGLFDNVRKLFAATPAAKKRHYDAGQFSFNVAKGRCAHCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAIQWQGLNIAQVLGLTVEQAVDVFAEQPGVLRSLHVLRDIGLGYLR
LGQPATELSGGEAQRIKLATELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNQLVDAG
HTVVVVEHEMRVVAQSDWVIDIGPGAGDMGGKVVASGAPQKVARSKKSRTAPFLAKELP
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacagcgcaccctccctccgctcactgctcaacggcccgggtttgtccgggtt
cgcggcgcccgcgaacataacctgcgcaatgtcgatgtggacattccacgggatgccctg
gtggtgtttaccggggtgtcgggttcgggcaagtcgtcgctggccttttccacggtgtac
gccgaggcccagcgccgctatttcgagtcggtggcgccctatgcacggcgcctgatcgac
caggtcggcgtacccgatgtggactccatcgaaggcttgcctccggctgtggccctgcaa
cagcagcgcggtacgccgagtgcgcgttcgtcggtgggcagcgtgacgaccttgtccagc
ctgatccgcatgctgtattcccgcgccggccactatccgccgggccaggcgatgctgtat
gccgaagacttttcgccgaacctgccccagggcgcctgtccgcaatgccatggcctgggc
cgtgtgtatgaagtgaccgaggcgctgatggtgcccgatccgtcgctgaccattcgccag
cgcgccgtggcgtcctggccgctggcatggcaaggccagaacctgcgcgacatcctggtg
accctgggttatgacgtcgacattccctggcgcgacctgccgaaaaagcagcgcgactgg
attttgttcaccgaagaaaccccgaccgtgccggtgtatgccggcttcaccccggagcag
acgcgcgacgcgctcaaacgcaagctggagccgagttaccaaggcactttcagtggtgcg
cggcgctacatcctgcacaccttcacccacacccaaagcgcgctgatgaaaaagcgcgtc
gcgcaatttatgcaaggcagtgcctgcccgttgtgcgctggcaagcggctgacccaggca
gcgttgtcggtaaagtttgccggggtggatatcggtgagttgtcgcaactgtcgctggta
caactggccgagctgctgcggccggtggcggcggggcaggacacaatgaagctgtcggtg
gaaaagcgcctggctgcccagcgcattgcccaggacctgttggagcgggtcagcaccttg
atcgaactgggcctggggtatctgtccctggagcgcagcacgccgaccttgtcgtccggg
gagttgcagcgcttacgcctggcgacccaattgggctcacagttgtttggtgtgatctat
gtgttggatgagccgtcggccgggctgcatcccgcggacggtgaggcgttgttcaccgcg
cttgaacgtttgaaagcggcgggcaactcattgtttgtggtggaacatgacctggaaacc
atgcgccgcgctgactggctgatcgacgtcggcccggcggcgggtgaacatggcgggcaa
gtgttgtacagcgggccacccgccggcttggcggcggtcgaggcgtcgcagatccgcgag
tacctgtttgccgagcggcgcccgtcgacggcgtcgcaacgtccaccccagggttggttg
cagctcgaaggcgtgacgcgcaataacctcaatgacttgagcgtggcgttccctctgggt
tgtttcacggcggtgaccggtgtttctggctcgggcaagtccagcctggtcagccaggcg
ttgctggaactggtcggcagcggcctgggccgcgtgccggacaatgacgaggaacgcagc
ctggaagatgacgcgccgcaaaccagtggcgggcatatcagcgccgggctggaacacctg
cgccgtctggtgcaggttgaccagaagcccatcggccgtaccccgcgttccaacctggcg
acctacaccgggctgttcgacaacgtgcgcaaactgttcgccgccacgccggcggcgaag
aagcgccattacgatgccgggcagttctcgttcaacgtcgccaagggccgctgcgcgcat
tgcgagggcgaagggtttgtcagcgttgaattactgttcatgcccagcgtgtatgccccc
tgcccgacgtgccatggggcgcgctacaaccccgaaaccctggcgatccaatggcaaggc
ctgaacattgcgcaagtgctggggctgaccgtggagcaggcggtggacgtgtttgccgaa
caaccgggcgtcctgcgttcgctgcacgtactgcgtgatatcggcctgggttacttgcgc
ctgggccaaccggcgactgaactgtcggggggtgaagcgcaacgcatcaagctcgccact
gaactgcaacgcaatgcccgtggcgccaccctgtatgtgctggatgagccgaccaccggc
ttgcatccacgggatgtcgaccgcttgctcagccagctcaatcagttggtggacgccggg
catacggtggttgtggtggagcatgaaatgcgcgtggtggcccagagtgactgggtgatc
gatatcgggccgggggcaggggacatgggcggcaaggtagtcgccagcggcgcaccgcag
aaggtggccaggagcaagaagagccgcaccgcgccgttccttgccaaggaactgccctga
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