Pirellula staleyi: Psta_3988
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Entry
Psta_3988 CDS
T01147
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
psl
Pirellula staleyi
Pathway
psl02024
Quorum sensing
psl03060
Protein export
psl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Psta_3988
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Psta_3988
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psta_3988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psl02044
]
Psta_3988
Secretion system [BR:
psl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Psta_3988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
Sec_GG
MMPL
SecD_1st
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
ADB18642
UniProt:
D2R231
LinkDB
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Position
complement(5182129..5185707)
Genome browser
AA seq
1192 aa
AA seq
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MIVEASQSLLLAANRLIDLSASPVLGVSIEAVIVIAAIVIGYALGFLIAKNLRAPEYGWK
LGLVLAAFLGALPMVLFGNYKLGVDLQGGVILVYEVDKVETAALDPQGRSDNWDMPALIK
VLGKRLNPDGLKEIVIRPFGTEQIEIVVPEVDSNEVELIKQRITTGGALRFMVVADPSID
QQLVEIAREQSQRPGLELEKSVKNGEELIGFWARAARETDGDPESAETAQFRDPSLFYSV
IRDARTGQIIDLPPNVIGQLAQNPGFFAPYLQSLGHKQIDVLLTFNQDYDIRGEDLGVPA
EGRDSQLRPCILFSMKGEGRAKMGALTSANLQRKLAIVFDNELLSAPTIQERISDNGQIT
GQFSEAEVRFMVEILKSGSMPVVLYKNPISENRIGSILGMDTIIKGSRAIIVSLLLVLGF
VLVYYRVSGIVACFALVLNILLTVAAMILLQAPFTLPGLAGLVLTVGMSVDANVLIYERI
REELARGAALRMAIRNGFERAFTTILDSNLTTLLTAVVLYVIGTDQIRGFGISLIFGILT
SMFTAVFCSRVILELGERAFRWKTLEMTKFMTNPTIDWVKYFAPATTVSVVLILIGLVAT
IARGPGLFDIDLAGGTSVTFTLKEPIQDAEVRTMLDSVFKGAVNESTKSKVDYLINEVQV
EGSPAGSNYKVDSSLEEVDDLKKLVEEAFTKDGKLLLTTFAMSADAPVEVKEATPPPVDT
RTPETTPPATEKPGEVPAEVPAEKPAETPAAEKPAEAPKAEEPPAEAPKAEDKPAEEAPK
TEEKPADEKPAEEKPAEEAKPAESTEPAAEGSCQEPAADDKPADEAKPEEKPAEEKPAET
TPPAEAAPAEEKPADAPKTEDKPAEEKPAAEATPVPEAPAAVAAPEGPATTTETPATPAV
VANEPEVKSSFKLTFDTSSISAQALRDRVLNAARSAINEDLSVKLENPDWDNLDQTAAFK
EWTVTLPVSTDKAAKVIDAMKSELDGAPVWQTSSKIGGQVSSDTRWRAIAALAFSIAGMI
AYIWYRFNNVTWGIAAAVALLHDSLIMLGAIAASLWLTSLLGFAGVEEFKISLPVVAAFL
TLIGYSVNDTIVIFDRIREIRGKSPDITSKIVNDSVNQTLSRSLLTSGTTLMVVTILYFF
GGPGVHAFAFALVIGVIAGSYSTIYIASPILLWLLGKEIAAPAAAPAEVVKK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgaagcttcgcaaagtttgctgttggctgccaatcgactaatcgatttgtct
gcctctcccgtcttgggagttagcatcgaagcggtgatcgtgatcgccgccatcgtgatt
ggctacgctttggggttcttgattgccaagaacctgcgagcccccgaatacggctggaag
ctcgggctggtgctcgccgcttttctcggcgcactaccgatggtccttttcggcaattac
aagctgggggtcgacctgcaaggtggtgtgatcctggtttatgaagtcgataaagtcgaa
accgccgcgctcgatccccagggtcgctccgacaactgggacatgcccgcactgatcaag
gtgctcggcaagcgtttgaatcccgatggtcttaaagaaatcgtgattcgccccttcggc
accgagcagatcgaaatcgtcgttcctgaagtcgactccaacgaagtcgaactcatcaag
caacgcatcaccaccggtggtgccctccgcttcatggtggtggctgatccctcgatcgat
cagcagctggtggaaatcgctcgcgagcaatcgcagcgtcccggtttggaactcgaaaag
agcgtaaagaatggcgaagagctgatcggtttttgggcccgcgcagctcgcgaaaccgat
ggcgatcctgaaagtgccgaaacggctcagttccgcgatccgagcctgttctactccgtc
attcgcgatgcccggaccggtcaaatcatcgatctgccaccgaatgttatcggccagttg
gcccagaaccctggtttctttgcaccctacctgcaatcgctcggccacaagcaaatcgac
gttctgctgacattcaaccaggactacgacattcgtggcgaagacctcggtgtcccggcc
gaaggtcgcgatagccagctccgtccttgcattctcttctcgatgaagggtgaggggcgg
gcgaagatgggtgcgctcacctcggccaacttgcagcgtaagctcgccattgtgttcgac
aatgaactcctgagcgctccgacgattcaagaacgcatttccgacaacggccaaatcacc
ggccagttctcggaagctgaagttcgcttcatggtcgaaattctgaagtcgggcagcatg
cctgtggtgctctacaagaacccgatcagcgaaaaccgaatcggttcgatcctgggcatg
gacaccatcatcaaaggcagccgcgcgatcattgtgtcgctcctcctggtgctcggtttc
gtactcgtctattaccgcgtctcgggaatcgtggcctgctttgccctggtactcaacatc
ctgttgaccgtggcagcgatgattttgctgcaggctccgttcacacttcctggtttggcc
gggctggtgctcacagtgggtatgagcgtcgatgccaacgtgctgatctacgaacgtatc
cgggaagaacttgctcgtggcgctgctctgcggatggccattcgcaatggtttcgagcgt
gcgttcaccacgattctcgacagtaacttgaccacactcctcacggcggtggttctctac
gtgatcggtaccgaccagatccgtggcttcggcatttcgctgatcttcggtattctcacg
agcatgttcacggcagtcttttgctcgcgtgtgatcctggaacttggcgaacgagccttc
cgctggaagaccctcgagatgaccaagttcatgaccaaccccacgatcgactgggtgaag
tatttcgcgccagccaccacggtctcggtggtgctgattctgatcggactggtcgccacc
attgctcgtggacctggcctgtttgatatcgatctggcaggtggcaccagcgtgaccttc
acgctcaaagagccgatccaagatgctgaagtccggacaatgctcgactcggtcttcaaa
ggtgccgtgaacgaatcgacgaagagcaaagttgactatctgatcaatgaagtgcaagtc
gaaggttcacctgcaggatcgaactacaaggtcgacagctcgctggaagaggtggatgac
ctgaagaagttggttgaagaggcgttcaccaaggatggcaagttgctcctcaccaccttc
gcgatgagcgccgatgctcccgtggaagtgaaggaagcaacgccaccaccggtcgatact
cgtactccggaaacgaccccacccgctacggaaaagccgggtgaagtccctgccgaagtt
ccagcggagaagcctgctgaaactcccgccgctgaaaagccagcggaagctcccaaggct
gaagagccaccggcagaagcacccaaggcagaagataagcctgccgaagaagcgccgaag
acggaggaaaaaccggcagacgagaagcccgccgaagagaagccagcggaagaagcgaaa
cctgccgagtcgaccgagcctgctgccgaagggagctgccaagagccagctgctgacgac
aagcccgccgacgaagctaagcccgaagaaaagccagccgaagagaagccagcggagacc
acgccgccagccgaagctgctccagcggaagagaagcctgcggatgctccgaagactgaa
gacaaaccggcagaagagaagccagctgctgaggcaactccagtgcctgaagcaccggct
gcagtcgctgctcccgagggacctgccaccactaccgagacccctgccactccagcagtt
gtcgccaatgaacctgaagtgaagtcgtcgttcaagctgacgttcgataccagctcgatc
agtgctcaagcactccgcgatcgggtgctcaacgccgctcgctcggccatcaacgaagat
ctgtcggtgaagctcgagaaccccgactgggacaatctcgatcaaacagcagcgttcaaa
gagtggaccgtgaccctgcccgtttcgaccgataaagcggccaaggtgatcgatgcgatg
aagtcggaactcgatggtgctcctgtgtggcaaacctcgagcaagattggtggtcaagtt
tcgagcgatactcgctggcgtgcaattgctgcactcgccttcagcatcgccggcatgatc
gcttacatctggtatcgatttaacaacgtcacttggggtatcgcagcagctgttgctctg
ctgcacgattcgctgatcatgctcggtgcgattgctgccagcctgtggctcaccagcctc
ctcggctttgcgggggtggaagagttcaagatcagcctgccggtggtagccgcgttcctg
acgctgattggctactcggtgaacgatacgatcgtgatcttcgaccgtattcgcgaaatt
cgtggcaagagccccgatatcacgagcaagattgtcaacgacagtgtgaatcagaccctc
agccgcagtttgctcacctcgggcacgacgctgatggtggtgacgattctctacttcttt
ggtggtcctggggtgcacgcgtttgcgtttgctctggtgattggtgtgatcgctggttcg
tacagcacgatctacatcgcctcgccaatcttgctgtggctgcttggcaaagagattgcg
gcaccagccgcagctcctgccgaagtcgtgaagaagtaa
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